RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 CTNNB1P35222 781 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 PBX1P40424 430 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 KLK7P49862 253 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 PLCB3Q01970 1234 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 BIRC3Q13489 604 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 NR1I3Q14994 352 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 SPOUT1Q5T280 376 aaKnown RBP10.64□□□□□ -0.71
CLN8-202ENST00000517514 OSTM1Q86WC4 334 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 ARHGEF19Q8IW93 802 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 EHBP1Q8NDI1 1231 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 FBXL13Q8NEE6 735 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 SPPL3Q8TCT6 385 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 TIFAQ96CG3 184 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 LRCH3Q96II8 777 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 HPDLQ96IR7 371 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 SUSD3Q96L08 255 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 B3GALT6Q96L58 329 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 TGS1Q96RS0 853 aaKnown RBP10.64□□□□□ -0.71
CLN8-202ENST00000517514 CRACR2AQ9BSW2 395 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 ALG13Q9NP73 1137 aaKnown RBP10.64□□□□□ -0.71
CLN8-202ENST00000517514 RAB20Q9NX57 234 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 GDAP2Q9NXN4 497 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 SPG21Q9NZD8 308 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 MSRAQ9UJ68 235 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 MTUS1Q9ULD2 1270 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 SIK3Q9Y2K2 1263 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 PLXNA3P51805 1871 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 GTPBP10A4D1E9 387 aaKnown RBP10.63□□□□□ -0.71
CLN8-202ENST00000517514 KPNA7A9QM74 516 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 GOLGA6L19H0YKK7 550 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 EPHB6O15197 1021 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 GRM6O15303 877 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 STX10O60499 249 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 LILRB3O75022 631 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 PHACTR2O75167 634 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 NOL4O94818 638 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 CDK11BP21127 795 aaKnown RBP10.63□□□□□ -0.71
CLN8-202ENST00000517514 FGFR3P22607 806 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 TKTP29401 623 aaKnown RBP10.63□□□□□ -0.71
CLN8-202ENST00000517514 PIK3CAP42336 1068 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 ALDH7A1P49419 539 aaKnown RBP10.63□□□□□ -0.71
CLN8-202ENST00000517514 TAF6P49848 677 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 ERVFC1P60507 584 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 SOWAHAQ2M3V2 549 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 PPP2R2DQ66LE6 453 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 PHLDB3Q6NSJ2 640 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 FUT10Q6P4F1 479 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 GJB7Q6PEY0 223 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 USP37Q86T82 979 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 UBR7Q8N806 425 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 KBTBD7Q8WVZ9 684 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 KAT5Q92993 513 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 SENP8Q96LD8 212 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 RTP3Q9BQQ7 232 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 COLEC11Q9BWP8 271 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 PLVAPQ9BX97 442 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 INTS2Q9H0H0 1204 aaKnown RBP10.63□□□□□ -0.71
CLN8-202ENST00000517514 CHST7Q9NS84 486 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 L1RE1Q9UN81 338 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 PCDHGC5Q9Y5F6 944 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.63□□□□□ -0.71
CLN8-202ENST00000517514 MYO7AQ13402 2215 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 EYSQ5T1H1 3165 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 MYO9BQ13459 2157 aa10.63□□□□□ -0.71
CLN8-202ENST00000517514 PTPRDP23468 1912 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 FSD2A1L4K1 749 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 H3BNC9 293 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 FSCN2O14926 492 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 HCRTO43612 131 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 TBC1D4O60343 1298 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 N4BP1O75113 896 aaKnown RBP10.62□□□□□ -0.71
CLN8-202ENST00000517514 TADA2AO75478 443 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 CYP11A1P05108 521 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 RB1P06400 928 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 ATICP31939 592 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 ASPAP45381 313 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 CDH8P55286 799 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 NOP14P78316 857 aaKnown RBP10.62□□□□□ -0.71
CLN8-202ENST00000517514 TRPC3Q13507 836 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 MRPL58Q14197 206 aaKnown RBP10.62□□□□□ -0.71
CLN8-202ENST00000517514 SGSM1Q2NKQ1 1148 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 ZNF699Q32M78 642 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 RTP2Q5QGT7 225 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 KIAA0319Q5VV43 1072 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 TRIM65Q6PJ69 517 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 SARM1Q6SZW1 724 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 RSPO2Q6UXX9 243 aaPredicted RBP10.62□□□□□ -0.71
CLN8-202ENST00000517514 DDX53Q86TM3 631 aaKnown RBP10.62□□□□□ -0.71
CLN8-202ENST00000517514 ZNF560Q96MR9 790 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 KREMEN1Q96MU8 473 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 SAMD11Q96NU1 681 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 ERGIC2Q96RQ1 377 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 ARID3AQ99856 593 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 MRPL45Q9BRJ2 306 aaKnown RBP10.62□□□□□ -0.71
CLN8-202ENST00000517514 ANP32EQ9BTT0 268 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 HERC2P3Q9BVR0 1158 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 BCO2Q9BYV7 579 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 XPO4Q9C0E2 1151 aaKnown RBP10.62□□□□□ -0.71
CLN8-202ENST00000517514 ZBP1Q9H171 429 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 GANQ9H2C0 597 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms