RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 B4GALNT4Q76KP1 1039 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SLC29A4Q7RTT9 530 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TAS1R1Q7RTX1 841 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ARMC9Q7Z3E5 817 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF804AQ7Z570 1209 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 COL23A1Q86Y22 540 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RBM12BQ8IXT5 1001 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF440Q8IYI8 595 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PARP8Q8N3A8 854 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CLEC18CQ8NCF0 446 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GADD45GIP1Q8TAE8 222 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FGFBP3Q8TAT2 258 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GTF3C2Q8WUA4 911 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SSH1Q8WYL5 1049 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SLC25A28Q96A46 364 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ATG4CQ96DT6 458 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 IL17RAQ96F46 866 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PGBD1Q96JS3 809 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RITA1Q96K30 269 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 EPYCQ99645 322 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SF3B5Q9BWJ5 86 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 C1QTNF4Q9BXJ3 329 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 AMNQ9BXJ7 453 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TRIM15Q9C019 465 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PLEKHA4Q9H4M7 779 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DDX31Q9H8H2 851 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CHST11Q9NPF2 352 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DDX43Q9NXZ2 648 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CLDND1Q9NY35 253 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DONSONQ9NYP3 566 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SAE1Q9UBE0 346 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TIMELESSQ9UNS1 1208 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TCF19Q9Y242 345 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CSAG2Q9Y5P2 127 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GAKO14976 1311 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MUC12Q9UKN1 5478 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 A0A0J9YWU9 116 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 A0A1B0GTW7 788 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 POM121CA8CG34 1229 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 B5MCH6 92 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HNRNPDLO14979 420 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 EPHB6O15197 1021 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CBFA2T2O43439 604 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 AMBPP02760 352 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KLKB1P03952 638 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CHRM2P08172 466 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 EBLN1P0CF75 366 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CTSAP10619 480 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RARBP10826 455 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 NME1P15531 152 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TBXAS1P24557 533 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TLX1P31314 330 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MC4RP32245 332 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 P2RX3P56373 397 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MRPS5P82675 430 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FMR1Q06787 632 aaKnown RBP eCLIP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TBX2Q13207 712 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SF3B2Q13435 895 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MTX1Q13505 466 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TCEAL1Q15170 157 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TESK1Q15569 626 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FAM189A2Q15884 450 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KRTAP6-1Q3LI64 71 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RNF212Q495C1 297 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 LARP7Q4G0J3 582 aaKnown RBP eCLIP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MANEAQ5SRI9 462 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TDRD10Q5VZ19 366 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 EFCAB12Q6NXP0 572 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ABHD17CQ6PCB6 329 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 LRSAM1Q6UWE0 723 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TRILQ7L0X0 811 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 OTOP3Q7RTS5 596 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 REC114Q7Z4M0 266 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 XYLT1Q86Y38 959 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TICAM1Q8IUC6 712 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CCDC103Q8IW40 242 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 NPLOC4Q8TAT6 608 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 OIT3Q8WWZ8 545 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GATAD2BQ8WXI9 593 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DIO2Q92813 273 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RNF34Q969K3 372 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ALKBH8Q96BT7 664 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PBKQ96KB5 322 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DUX5Q96PT3 197 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ORAI2Q96SN7 254 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RBM4BQ9BQ04 359 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZSWIM1Q9BR11 485 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF518BQ9C0D4 1074 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RBM38Q9H0Z9 239 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MMP28Q9H239 520 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CDIP1Q9H305 208 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RNPEPQ9H4A4 650 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KANSL2Q9H9L4 492 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MYOZ2Q9NPC6 264 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GPRC5CQ9NQ84 441 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TMEM184CQ9NVA4 438 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 WHRNQ9P202 907 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 BTBD7Q9P203 1132 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 POGKQ9P215 609 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms