RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 RFX8Q6ZV50 586 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 KRTAP5-2Q701N4 177 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 FASTKD5Q7L8L6 764 aaKnown RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 KRT74Q7RTS7 529 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 RD3Q7Z3Z2 195 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 BRAPQ7Z569 592 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 BMP8AQ7Z5Y6 402 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 FGD2Q7Z6J4 655 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 MRPL10Q7Z7H8 261 aaKnown RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 GALNT5Q7Z7M9 940 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 STK32CQ86UX6 486 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZNF227Q86WZ6 799 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 LMNTD2Q8IXW0 634 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 KIAA0319LQ8IZA0 1049 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ADGRG2Q8IZP9 1017 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 CMTM4Q8IZR5 234 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 KRT78Q8N1N4 520 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 NXPE1Q8N323 547 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 FAM26EQ8N5C1 309 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 MSL3Q8N5Y2 521 aaKnown RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 OR2C3Q8N628 320 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 EFHBQ8N7U6 833 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 TSPYL6Q8N831 410 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 LSMEM1Q8N8F7 131 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 KIAA1958Q8N8K9 716 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 PLA2G15Q8NCC3 412 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ARRDC4Q8NCT1 418 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 FAM156AQ8NDB6 213 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 RCBTB1Q8NDN9 531 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 TMEM52Q8NDY8 209 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 NLGN4YQ8NFZ3 816 aaPredicted RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 SPATA3Q8NHX4 192 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 SLC30A5Q8TAD4 765 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 NPLOC4Q8TAT6 608 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 PIP4K2CQ8TBX8 421 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 CPT1CQ8TCG5 803 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 PARD3BQ8TEW8 1205 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 DIS3LQ8TF46 1054 aaKnown RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 COG1Q8WTW3 980 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 LMBR1Q8WVP7 490 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 TRAPPC12Q8WVT3 735 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ATRIPQ8WXE1 791 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZCCHC14Q8WYQ9 949 aaKnown RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 RSPH1Q8WYR4 309 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 SLC5A5Q92911 643 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 EXTL1Q92935 676 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ATP2A3Q93084 1043 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 HPS3Q969F9 1004 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 OSBP2Q969R2 916 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ATP6V1E2Q96A05 226 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 TBC1D20Q96BZ9 403 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 HMCESQ96FZ2 354 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 LTV1Q96GA3 475 aaPredicted RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 VMP1Q96GC9 406 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 TMEM41AQ96HV5 264 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 SCLYQ96I15 445 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 DYDC2Q96IM9 177 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZNF496Q96IT1 587 aaPredicted RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 RSRC1Q96IZ7 334 aaKnown RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 HIC2Q96JB3 615 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 CDHR1Q96JP9 859 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZC3H10Q96K80 434 aaKnown RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 MRGPRX3Q96LB0 322 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 SGCZQ96LD1 299 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZSCAN31Q96LW9 406 aaPredicted RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 LRGUKQ96M69 825 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 NOX5Q96PH1 765 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 GBP4Q96PP9 640 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 MED15Q96RN5 788 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 TUBGCP5Q96RT8 1024 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ORAI2Q96SN7 254 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 TBCBQ99426 244 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 SEC62Q99442 399 aaKnown RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 MAP3K14Q99558 947 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 MNTQ99583 582 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 KCNJ15Q99712 375 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ACO2Q99798 780 aaKnown RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 FOXB1Q99853 325 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 TREX2Q9BQ50 279 aaPredicted RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 NUDT16L1Q9BRJ7 211 aaKnown RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 TACO1Q9BSH4 297 aaKnown RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 CRB3Q9BUF7 120 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 BOCQ9BWV1 1114 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 PLA2G12BQ9BX93 195 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 AP1M1Q9BXS5 423 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 SLC26A6Q9BXS9 759 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ALOXE3Q9BYJ1 711 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 CELF4Q9BZC1 486 aaKnown RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 OSBPL6Q9BZF3 934 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 LRRC27Q9C0I9 530 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 BTBD1Q9H0C5 482 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZCWPW1Q9H0M4 648 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 LMAN2LQ9H0V9 348 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ALDH8A1Q9H2A2 487 aaPredicted RBP0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 TMEM60Q9H2L4 133 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 IKZF4Q9H2S9 585 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 RNPEPQ9H4A4 650 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 JMJD4Q9H9V9 463 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 PLEKHA5Q9HAU0 1116 aa0.67□□□□□ -2.3
RNU4-54P-201ENST00000516428 ATP6V0A4Q9HBG4 840 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms