RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 DYRK1AQ13627 763 aa3.95□□□□□ -1.78
RNU4-49P-201ENST00000516080 INAVAQ3KP66 663 aa3.95□□□□□ -1.78
RNU4-49P-201ENST00000516080 PPP4R3AQ6IN85 833 aa3.95□□□□□ -1.78
RNU4-49P-201ENST00000516080 GADL1Q6ZQY3 521 aa3.95□□□□□ -1.78
RNU4-49P-201ENST00000516080 SRRM1Q8IYB3 904 aaKnown RBP3.95□□□□□ -1.78
RNU4-49P-201ENST00000516080 JADE3Q92613 823 aa3.95□□□□□ -1.78
RNU4-49P-201ENST00000516080 TLR10Q9BXR5 811 aa3.95□□□□□ -1.78
RNU4-49P-201ENST00000516080 KMT5AQ9NQR1 393 aa3.95□□□□□ -1.78
RNU4-49P-201ENST00000516080 ASB6Q9NWX5 421 aa3.95□□□□□ -1.78
RNU4-49P-201ENST00000516080 CALCOCO1Q9P1Z2 691 aa3.95□□□□□ -1.78
RNU4-49P-201ENST00000516080 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.95□□□□□ -1.78
RNU4-49P-201ENST00000516080 PCDHA13Q9Y5I0 950 aa3.95□□□□□ -1.78
RNU4-49P-201ENST00000516080 SETD1BQ9UPS6 1966 aaKnown RBP3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 CCDC195A0A1B0GUA6 201 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 KLHL33A6NCF5 533 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 ANXA1P04083 346 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 RPLP2P05387 115 aaKnown RBP3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 GATA3P23771 443 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 POU6F2P78424 691 aaPredicted RBP3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 FOXF2Q12947 444 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 ACAP2Q15057 778 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 PTPRRQ15256 657 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 PREPLQ4J6C6 727 aaPredicted RBP3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 MICALCLQ6ZW33 695 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 ZNF365Q70YC5 407 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 PTF1AQ7RTS3 328 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 PEG10Q86TG7 708 aaKnown RBP3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 C1orf162Q8NEQ5 155 aaPredicted RBP3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 TOR1AIP2Q8NFQ8 470 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 SLC30A5Q8TAD4 765 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 SARAFQ96BY9 339 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 KLHL32Q96NJ5 620 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 IL17RBQ9NRM6 502 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 CTTNBP2NLQ9P2B4 639 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 TUBD1Q9UJT1 453 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 MRFAP1Q9Y605 127 aa3.94□□□□□ -1.78
RNU4-49P-201ENST00000516080 E7ENX8 843 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 SUN1O94901 812 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 CD1AP06126 327 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 SBK3P0C264 359 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 C5AR1P21730 350 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 MAPK10P53779 464 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 NXPH1P58417 271 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 TAP2Q03519 686 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 ITIH3Q06033 890 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 HLXQ14774 488 aaPredicted RBP3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 CD300EQ496F6 205 aaPredicted RBP3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 KIAA1614Q5VZ46 1190 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 DDX42Q86XP3 938 aaKnown RBP eCLIP3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 ADGRG5Q8IZF4 528 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 CFAP52Q8N1V2 620 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 TFAP2BQ92481 460 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 LPIN2Q92539 896 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 SNX19Q92543 992 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 RAB24Q969Q5 203 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 FAXDC2Q96IV6 333 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 MRGPRX4Q96LA9 322 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 IMPG2Q9BZV3 1241 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 CPNE5Q9HCH3 593 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 MAN1C1Q9NR34 630 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 IPPQ9Y573 584 aa3.93□□□□□ -1.78
RNU4-49P-201ENST00000516080 TOR1BO14657 336 aa3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 HTRA2O43464 458 aaPredicted RBP3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 IARSP41252 1262 aaKnown RBP3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 ZNF280AP59817 542 aaPredicted RBP3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 KRT85P78386 507 aa3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 TLE1Q04724 770 aa3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 TSTD2Q5T7W7 516 aa3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 SYDE2Q5VT97 1194 aa3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 EGFLAMQ63HQ2 1017 aa3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 ZNF788Q6ZQV5 615 aa3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 CBARPQ8N350 705 aaPredicted RBP3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 B3GALNT2Q8NCR0 500 aa3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 SLC17A8Q8NDX2 589 aa3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 ANKS1AQ92625 1134 aa3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 CLPTM1LQ96KA5 538 aa3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 FAM126AQ9BYI3 521 aaPredicted RBP3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 VSX1Q9NZR4 365 aaPredicted RBP3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 LIMCH1Q9UPQ0 1083 aa3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 CFAP20Q9Y6A4 193 aaKnown RBP3.92□□□□□ -1.78
RNU4-49P-201ENST00000516080 CCDC154A6NI56 674 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 ADM5C9JUS6 153 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 GCOM1H8Y6P7 765 aaPredicted RBP3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 XPOTO43592 962 aaKnown RBP3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 ABCG1P45844 678 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 KRTAP10-11P60412 298 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 SRSF4Q08170 494 aaKnown RBP3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 IL10RAQ13651 578 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 TXNRD1Q16881 649 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 FAM153CQ494X1 144 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 FLYWCH1Q4VC44 716 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 PAPD7Q5XG87 772 aaKnown RBP3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 TAPT1Q6NXT6 567 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 TSHZ1Q6ZSZ6 1077 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 TMPRSS9Q7Z410 1059 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 TTC7BQ86TV6 843 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 PDSS2Q86YH6 399 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 SH2D3CQ8N5H7 860 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 PDPRQ8NCN5 879 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms