RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 TNNC1P63316 161 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 FMO1Q01740 532 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 BFSP2Q13515 415 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 IFI16Q16666 785 aaKnown RBP8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 WDR72Q3MJ13 1102 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 XKR4Q5GH76 650 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 GLRA4Q5JXX5 417 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SCARA5Q6ZMJ2 495 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TRIM72Q6ZMU5 477 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TTC39CQ8N584 583 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 LRRC52Q8N7C0 313 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TRIM58Q8NG06 486 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CXorf38Q8TB03 319 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CAGE1Q8TC20 777 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CTNNBL1Q8WYA6 563 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DDX1Q92499 740 aaKnown RBP8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 C18orf25Q96B23 403 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NOX5Q96PH1 765 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ALS2CR12Q96Q35 445 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NAPGQ99747 312 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 BCO2Q9BYV7 579 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CXCL16Q9H2A7 254 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PDCL3Q9H2J4 239 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RNF39Q9H2S5 420 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 FAM124BQ9H5Z6 455 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CYP3A43Q9HB55 503 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ACP6Q9NPH0 428 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CISHQ9NSE2 258 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TUBGCP4Q9UGJ1 667 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 POLIQ9UNA4 740 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TANC1Q9C0D5 1861 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 A0A0A6YYK5 440 aaPredicted RBP8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SMIM28A0A1B0GU29 152 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ANKRD62A6NC57 917 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RIOK3O14730 519 aaKnown RBP8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 FANCGO15287 622 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 THAP12O43422 761 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 BUB1O43683 1085 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZNF623O75123 536 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MOCS3O95396 460 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 FTLP02792 175 aaPredicted RBP8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SKIP12755 728 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ATF7P17544 494 aaPredicted RBP8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CYP3A5P20815 502 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NOP2P46087 812 aaKnown RBP8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RAP1GAPP47736 663 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CDK7P50613 346 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DSC3Q14574 896 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 C9orf57Q5W0N0 161 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 FBXO46Q6PJ61 603 aaPredicted RBP8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CTU1Q7Z7A3 348 aaKnown RBP8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MRPL10Q7Z7H8 261 aaKnown RBP8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PALB2Q86YC2 1186 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 FAM126BQ8IXS8 530 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TMEM130Q8N3G9 435 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PGBD4Q96DM1 585 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZNF560Q96MR9 790 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RPS6KC1Q96S38 1066 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PCDHB18PQ96TA0 734 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TRAIPQ9BWF2 469 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 OSBPL7Q9BZF2 842 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ISCUQ9H1K1 167 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SLC38A7Q9NVC3 462 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TAS2R14Q9NYV8 317 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PUF60Q9UHX1 559 aaKnown RBP8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 GIT1Q9Y2X7 761 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CAPN6Q9Y6Q1 641 aa8.16□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NCANO14594 1321 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 A0A0U1RQF3 1178 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ANO9A1A5B4 782 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PIRO00625 290 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PTGESO14684 152 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MGEA5O60502 916 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CALCAP01258 141 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TFRCP02786 760 aaKnown RBP8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PAEPP09466 180 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SELPP16109 830 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ABCB4P21439 1286 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MLH1P40692 756 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PNPLA4P41247 253 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TERF1P54274 439 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CDH8P55286 799 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TUBB2AQ13885 445 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CLEC16AQ2KHT3 1053 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SV2CQ496J9 727 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZNF394Q53GI3 561 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ACAD10Q6JQN1 1059 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PPP1R2P3Q6NXS1 205 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TRAF7Q6Q0C0 670 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 LRRC8DQ7L1W4 858 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DNAAF5Q86Y56 855 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DNAJC5GQ8N7S2 189 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RNF169Q8NCN4 708 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZNF606Q8WXB4 792 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RFFLQ8WZ73 363 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 LPPQ93052 612 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZFP42Q96MM3 310 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MMS19Q96T76 1030 aa8.15□□□□□ -1.1
SCARNA20.1-201ENST00000516009 GAD1Q99259 594 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms