RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 ADAM12O43184 909 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 POU3F3P20264 500 aaPredicted RBP10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 FGFR3P22607 806 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 NRIP1P48552 1158 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 GLUD2P49448 558 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 TAF6P49848 677 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 CDR1P51861 262 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 DSG1Q02413 1049 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 TRPC3Q13507 836 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 SMC1AQ14683 1233 aaKnown RBP10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 KIAA1841Q6NSI8 718 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 FOXR2Q6PJQ5 311 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 C15orf39Q6ZRI6 1047 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 FRMD5Q7Z6J6 570 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 LNX1Q8TBB1 728 aaPredicted RBP10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 SEMA4DQ92854 862 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 HPDLQ96IR7 371 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 SUSD3Q96L08 255 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 PI4K2AQ9BTU6 479 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 TTPALQ9BTX7 342 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 TLE6Q9H808 572 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 ITGA11Q9UKX5 1188 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 POLIQ9UNA4 740 aa10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 SF3B1O75533 1304 aaKnown RBP eCLIP10.47□□□□□ -0.73
SCARNA16-201ENST00000515981 CARNS1A5YM72 827 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 KPNA7A9QM74 516 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 M0QZQ0 153 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 CYB561D2O14569 222 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 IKBKBO14920 756 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 LINC01565O15544 149 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 HCRTO43612 131 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 TRAPPC3O43617 180 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 CLASP2O75122 1294 aaKnown RBP10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 LETM1O95202 739 aaPredicted RBP10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 HLA-DRAP01903 254 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 URODP06132 367 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 CNPP09543 421 aaKnown RBP10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 SPATA31D3P0C874 917 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 AARSP49588 968 aaKnown RBP eCLIP10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 MCCD1P59942 119 aaPredicted RBP10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 HYAL1Q12794 435 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 NCOA4Q13772 614 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 ZACNQ401N2 412 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 CBWD6Q4V339 395 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 CBWD3Q5JTY5 395 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 CBWD5Q5RIA9 395 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 VARS2Q5ST30 1063 aaKnown RBP10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 WSCD1Q658N2 575 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 SPOPLQ6IQ16 392 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 LLGL2Q6P1M3 1020 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 SPATA31D4Q6ZUB0 917 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 PALB2Q86YC2 1186 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 TRIM59Q8IWR1 403 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 ENOX1Q8TC92 643 aaKnown RBP10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 TAS1R2Q8TE23 839 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 SLC35C1Q96A29 364 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 CNOT6LQ96LI5 555 aaKnown RBP10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 KLHL5Q96PQ7 755 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 CLSTN3Q9BQT9 956 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 NSUN3Q9H649 340 aaKnown RBP10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 NGRNQ9NPE2 291 aaKnown RBP10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 PRDM6Q9NQX0 595 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 MRPL17Q9NRX2 175 aaKnown RBP10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 FANCLQ9NW38 375 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 LMCD1Q9NZU5 365 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 PCDHB8Q9UN66 801 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 NFE2L3Q9Y4A8 694 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 SNX9Q9Y5X1 595 aa10.46□□□□□ -0.73
SCARNA16-201ENST00000515981 EYSQ5T1H1 3165 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 TEX28O15482 410 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 CLSTN1O94985 981 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 FGFR1OPO95684 399 aaKnown RBP10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 CCDC192P0DO97 292 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 MTIF2P46199 727 aaKnown RBP10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 AP3M2P53677 418 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 ARPP19P56211 112 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 ELAVL2Q12926 359 aaKnown RBP10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 MRPL58Q14197 206 aaKnown RBP10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 NCAPHQ15003 741 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 PSMD5Q16401 504 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 SV2CQ496J9 727 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 CT47A1Q5JQC4 288 aaPredicted RBP10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 EP400NLQ6ZTU2 488 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 OSTM1Q86WC4 334 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 AOPEPQ8N6M6 819 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 LRRC52Q8N7C0 313 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 VN1R2Q8NFZ6 395 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 PIK3R5Q8WYR1 880 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 RTP3Q9BQQ7 232 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 XYLT2Q9H1B5 865 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 THAP9Q9H5L6 903 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 RXFP1Q9HBX9 757 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 METTL14Q9HCE5 456 aaKnown RBP10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 TMEM8AQ9HCN3 771 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 NXF1Q9UBU9 619 aaKnown RBP10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 L1RE1Q9UN81 338 aa10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 R3HCC1Q9Y3T6 440 aaKnown RBP10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.45□□□□□ -0.74
SCARNA16-201ENST00000515981 SPTBN5Q9NRC6 3674 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms