RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 ARHGDIAP52565 204 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 CCDC137Q6PK04 289 aaKnown RBP15.14■□□□□ 0.01
TRIO-222ENST00000515144 TRIM72Q6ZMU5 477 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 TBX20Q9UMR3 447 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 MSH4O15457 936 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 KRT14P02533 472 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 CCL23P55773 120 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 RTFDC1Q9BY42 306 aaPredicted RBP15.14■□□□□ 0.01
TRIO-222ENST00000515144 TMEM150BA6NC51 233 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 PNMA6AP0CW24 399 aaPredicted RBP15.14■□□□□ 0.01
TRIO-222ENST00000515144 SKIP12755 728 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 ADCYAP1R1P41586 468 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 BTG3Q14201 252 aaPredicted RBP15.14■□□□□ 0.01
TRIO-222ENST00000515144 ADGRA1Q86SQ6 560 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 ZFPM1Q8IX07 1006 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 TTC13Q8NBP0 860 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 TTC26A0AVF1 554 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 RFC1P35251 1148 aaPredicted RBP15.14■□□□□ 0.01
TRIO-222ENST00000515144 MTG1Q9BT17 334 aaPredicted RBP15.14■□□□□ 0.01
TRIO-222ENST00000515144 LATS2Q9NRM7 1088 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 RGPD5Q99666 1765 aa15.14■□□□□ 0.01
TRIO-222ENST00000515144 A0A087WZ62 844 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 NDUFS3O75489 264 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 ERVK-9P63128 1117 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 ERVK-24P63145 666 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 CNTN2Q02246 1040 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 ITPRIPL1Q6GPH6 555 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 TBC1D1Q86TI0 1168 aaPredicted RBP15.13■□□□□ 0.01
TRIO-222ENST00000515144 RBM23Q86U06 439 aaKnown RBP15.13■□□□□ 0.01
TRIO-222ENST00000515144 SRRM1Q8IYB3 904 aaKnown RBP15.13■□□□□ 0.01
TRIO-222ENST00000515144 SLC35G2Q8TBE7 412 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 CYTH2Q99418 400 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 FDXACB1Q9BRP7 624 aaPredicted RBP15.13■□□□□ 0.01
TRIO-222ENST00000515144 ARHGAP25P42331 645 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 EXOSC10Q01780 885 aaKnown RBP15.13■□□□□ 0.01
TRIO-222ENST00000515144 ARMC6Q6NXE6 501 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 DCP1BQ8IZD4 617 aaKnown RBP15.13■□□□□ 0.01
TRIO-222ENST00000515144 PIP4K2CQ8TBX8 421 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 BTBD6Q96KE9 485 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 DDX56Q9NY93 547 aaKnown RBP15.13■□□□□ 0.01
TRIO-222ENST00000515144 FMN2Q9NZ56 1722 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 H3BRB1 525 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 TMEM132BQ14DG7 1078 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 ENOSF1Q7L5Y1 443 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 DDI1Q8WTU0 396 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 ELMO2Q96JJ3 720 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 RUSC1Q9BVN2 902 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 TUT1Q9H6E5 874 aaKnown RBP15.13■□□□□ 0.01
TRIO-222ENST00000515144 PLAAQ9Y263 795 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 TRIM42Q8IWZ5 723 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 TRIM9Q9C026 710 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 ZNF185O15231 689 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 AP3M2P53677 418 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 FOPNLQ96NB1 174 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 NFKBIZQ9BYH8 718 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 KIF1AQ12756 1690 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 EPB42P16452 691 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 ZFXP17010 805 aaPredicted RBP15.13■□□□□ 0.01
TRIO-222ENST00000515144 TAF6P49848 677 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 PDIA5Q14554 519 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 SCG3Q8WXD2 468 aaKnown RBP15.13■□□□□ 0.01
TRIO-222ENST00000515144 RAB6BQ9NRW1 208 aa15.13■□□□□ 0.01
TRIO-222ENST00000515144 PGK1P00558 417 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 ACO1P21399 889 aaKnown RBP15.12■□□□□ 0.01
TRIO-222ENST00000515144 MDH1BQ5I0G3 518 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 CPSF2Q9P2I0 782 aaKnown RBP15.12■□□□□ 0.01
TRIO-222ENST00000515144 SUN2Q9UH99 717 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 MAPK9P45984 424 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 FSCN1Q16658 493 aaKnown RBP15.12■□□□□ 0.01
TRIO-222ENST00000515144 PALB2Q86YC2 1186 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 SEPT8Q92599 483 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 P2RX7Q99572 595 aaKnown RBP15.12■□□□□ 0.01
TRIO-222ENST00000515144 WNT8AQ9H1J5 351 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 PKP3Q9Y446 797 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 HNRNPCL2B2RXH8 293 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 PODXLO00592 558 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 SYNCRIPO60506 623 aaKnown RBP15.12■□□□□ 0.01
TRIO-222ENST00000515144 HNRNPCL1O60812 293 aaKnown RBP15.12■□□□□ 0.01
TRIO-222ENST00000515144 LRRC74AQ0VAA2 488 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 GRIK4Q16099 956 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 RFX8Q6ZV50 586 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 USP50Q70EL3 339 aaPredicted RBP15.12■□□□□ 0.01
TRIO-222ENST00000515144 ADGRF2Q8IZF7 708 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 KAT2BQ92831 832 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 DCTN4Q9UJW0 460 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 L3MBTL1Q9Y468 752 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 M0QYT0 321 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 NT5C2P49902 561 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 MEI1Q5TIA1 1274 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 ATG16L1Q676U5 607 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 ASAP3Q8TDY4 903 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 NR1H4Q96RI1 486 aaPredicted RBP15.12■□□□□ 0.01
TRIO-222ENST00000515144 ZSCAN9O15535 394 aaPredicted RBP15.12■□□□□ 0.01
TRIO-222ENST00000515144 PTRHD1Q6GMV3 140 aaKnown RBP15.12■□□□□ 0.01
TRIO-222ENST00000515144 RD3Q7Z3Z2 195 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 TIPINQ9BVW5 301 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 PPP1R9AQ9ULJ8 1098 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.12■□□□□ 0.01
TRIO-222ENST00000515144 FAM171A1Q5VUB5 890 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 USP49Q70CQ1 688 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms