RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 NOC3LQ8WTT2 800 aaKnown RBP8.99□□□□□ -0.97
CCL28-204ENST00000514421 AUTS2Q8WXX7 1259 aa8.99□□□□□ -0.97
CCL28-204ENST00000514421 ZNF830Q96NB3 372 aaPredicted RBP8.99□□□□□ -0.97
CCL28-204ENST00000514421 KLHL5Q96PQ7 755 aa8.99□□□□□ -0.97
CCL28-204ENST00000514421 TTPALQ9BTX7 342 aa8.99□□□□□ -0.97
CCL28-204ENST00000514421 KCTD10Q9H3F6 313 aa8.99□□□□□ -0.97
CCL28-204ENST00000514421 UBE2ZQ9H832 354 aaPredicted RBP8.99□□□□□ -0.97
CCL28-204ENST00000514421 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.99□□□□□ -0.97
CCL28-204ENST00000514421 SAMSN1Q9NSI8 373 aaKnown RBP8.99□□□□□ -0.97
CCL28-204ENST00000514421 DMAC2Q9NW81 257 aa8.99□□□□□ -0.97
CCL28-204ENST00000514421 DPP3Q9NY33 737 aa8.99□□□□□ -0.97
CCL28-204ENST00000514421 CLDND1Q9NY35 253 aa8.99□□□□□ -0.97
CCL28-204ENST00000514421 RBAKQ9NYW8 714 aaPredicted RBP8.99□□□□□ -0.97
CCL28-204ENST00000514421 FNIP2Q9P278 1114 aa8.99□□□□□ -0.97
CCL28-204ENST00000514421 PYCARDQ9ULZ3 195 aa8.99□□□□□ -0.97
CCL28-204ENST00000514421 TRAF3IP3Q9Y228 551 aa8.99□□□□□ -0.97
CCL28-204ENST00000514421 NUB1Q9Y5A7 615 aa8.99□□□□□ -0.97
CCL28-204ENST00000514421 ITIH6Q6UXX5 1313 aa8.99□□□□□ -0.97
CCL28-204ENST00000514421 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.98□□□□□ -0.97
CCL28-204ENST00000514421 PIRO00625 290 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 C2CD2LO14523 706 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 PSMA7O14818 248 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 SYN3O14994 580 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 EXOC3O60645 756 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 C1RP00736 705 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 SERPINC1P01008 464 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 CNPP09543 421 aaKnown RBP8.98□□□□□ -0.97
CCL28-204ENST00000514421 FGFR3P22607 806 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 KLRC2P26717 231 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 LTBRP36941 435 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 BRCC3P46736 316 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 CYP2J2P51589 502 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 CREMQ03060 361 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 STIM1Q13586 685 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 SNRNP35Q16560 246 aaKnown RBP8.98□□□□□ -0.97
CCL28-204ENST00000514421 PUS10Q3MIT2 529 aaKnown RBP8.98□□□□□ -0.97
CCL28-204ENST00000514421 LEXMQ3ZCV2 418 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 C9orf57Q5W0N0 161 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 SPECC1LQ69YQ0 1117 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 CENPPQ6IPU0 288 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.98□□□□□ -0.97
CCL28-204ENST00000514421 CEP57Q86XR8 500 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 IRF2BP1Q8IU81 584 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 CBWD2Q8IUF1 395 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.98□□□□□ -0.97
CCL28-204ENST00000514421 SMYD4Q8IYR2 804 aaPredicted RBP8.98□□□□□ -0.97
CCL28-204ENST00000514421 C3orf58Q8NDZ4 430 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 CCDC112Q8NEF3 446 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 LNX1Q8TBB1 728 aaPredicted RBP8.98□□□□□ -0.97
CCL28-204ENST00000514421 HASPINQ8TF76 798 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 NELFBQ8WX92 580 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 RIN2Q8WYP3 895 aaPredicted RBP8.98□□□□□ -0.97
CCL28-204ENST00000514421 CASP10Q92851 521 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 MFSD14AQ96MC6 490 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 THAP9Q9H5L6 903 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 PDE11AQ9HCR9 933 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 RTN4Q9NQC3 1192 aaKnown RBP8.98□□□□□ -0.97
CCL28-204ENST00000514421 THEGQ9P2T0 379 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 TUBGCP4Q9UGJ1 667 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 MAPK8IP1Q9UQF2 711 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 COL6A3P12111 3177 aa8.98□□□□□ -0.97
CCL28-204ENST00000514421 ANO9A1A5B4 782 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 BICDL2A1A5D9 508 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 TEX28O15482 410 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 LINC01565O15544 149 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 ADH1AP07327 375 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 NFICP08651 508 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 SRGAP2BP0DMP2 458 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 HOXB8P17481 243 aaPredicted RBP8.97□□□□□ -0.97
CCL28-204ENST00000514421 KCNA5P22460 613 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 FECHP22830 423 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 CCNE1P24864 410 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 RPL13P26373 211 aaKnown RBP8.97□□□□□ -0.97
CCL28-204ENST00000514421 EEF1GP26641 437 aaKnown RBP8.97□□□□□ -0.97
CCL28-204ENST00000514421 NDUFV1P49821 464 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 GUCY2FP51841 1108 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 LILRA4P59901 499 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 RBP5P82980 135 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 TFAMQ00059 246 aaKnown RBP8.97□□□□□ -0.97
CCL28-204ENST00000514421 CYP24A1Q07973 514 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 LRMPQ12912 555 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 KCNC3Q14003 757 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 NFIL3Q16649 462 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 DUOXA2Q1HG44 320 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 TCP11X2Q5H9J9 407 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 RTP2Q5QGT7 225 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 DSTYKQ6XUX3 929 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 TMC6Q7Z403 805 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 EFCAB13Q8IY85 973 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 CSGALNACT2Q8N6G5 542 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 APPL2Q8NEU8 664 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 SLC22A17Q8WUG5 538 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 PIK3R5Q8WYR1 880 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 SUSD3Q96L08 255 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 B3GALT6Q96L58 329 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 ASB2Q96Q27 587 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 FNBP1Q96RU3 617 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 DUSP9Q99956 384 aaKnown RBP8.97□□□□□ -0.97
CCL28-204ENST00000514421 CLEC1BQ9P126 229 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 DPP7Q9UHL4 492 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms