RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	DRC7	Q8IY82	874 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	GPR156	Q8NFN8	814 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CPT1C	Q8TCG5	803 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PARD3B	Q8TEW8	1205 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MYEOV	Q96EZ4	313 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CYFIP2	Q96F07	1278 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	APIP	Q96GX9	242 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RSAD1	Q9HA92	442 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PPCS	Q9HAB8	311 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	BCO1	Q9HAY6	547 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TRMT13	Q9NUP7	481 aa	Known RBP	4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MOCS1	Q9NZB8	636 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PADI4	Q9UM07	663 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SORCS3	Q9UPU3	1222 aa		4.2	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CFAP69	A5D8W1	941 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MYF5	P13349	255 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	IL2RB	P14784	551 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	HK1	P19367	917 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PAX3	P23760	479 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	BMPR1A	P36894	532 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RAB1A	P62820	205 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CDC42EP1	Q00587	391 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	POU5F1B	Q06416	359 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SP140	Q13342	867 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FGL2	Q14314	439 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RAB39A	Q14964	217 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ACAP1	Q15027	740 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ATP2B3	Q16720	1220 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PRR16	Q569H4	304 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	C1QL3	Q5VWW1	255 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	GPRIN1	Q7Z2K8	1008 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	GDF7	Q7Z4P5	450 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MRGPRE	Q86SM8	312 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MYLK4	Q86YV6	388 aa	Predicted RBP	4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MSL3	Q8N5Y2	521 aa	Known RBP	4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	OR2C3	Q8N628	320 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	C3orf20	Q8ND61	904 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MYRIP	Q8NFW9	859 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RIN2	Q8WYP3	895 aa	Predicted RBP	4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SLC9A6	Q92581	669 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	HOXB13	Q92826	284 aa	Predicted RBP	4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PHKB	Q93100	1093 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	EVI5L	Q96CN4	794 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	LRRC27	Q9C0I9	530 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MANSC1	Q9H8J5	431 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ARFGAP3	Q9NP61	516 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	DMRT3	Q9NQL9	472 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CALCOCO1	Q9P1Z2	691 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TPCN1	Q9ULQ1	816 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PCDHB1	Q9Y5F3	818 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PCDHGB6	Q9Y5F9	930 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	NR2E3	Q9Y5X4	410 aa		4.19	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TBKBP1	A7MCY6	615 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	GRXCR1	A8MXD5	290 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ISM1	B1AKI9	464 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PHGDH	O43175	533 aa	Known RBP	4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SH3BP5	O60239	455 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TMEM127	O75204	238 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FTH1P19	P0C7X4	201 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TRAPPC10	P48553	1259 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CASP5	P51878	434 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	NKX6-1	P78426	367 aa	Predicted RBP	4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SLC25A3	Q00325	362 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	NOG	Q13253	232 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	IL10RA	Q13651	578 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RALBP1	Q15311	655 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	BMT2	Q1RMZ1	405 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FAM214A	Q32MH5	1076 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CCDC157	Q569K6	752 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ANO1	Q5XXA6	986 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	LAIR1	Q6GTX8	287 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SWSAP1	Q6NVH7	229 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	LDLRAD3	Q86YD5	345 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	VPS37A	Q8NEZ2	397 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	OR7D4	Q8NG98	312 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	OR10H5	Q8NGA6	315 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PROKR1	Q8TCW9	393 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	LARP4B	Q92615	738 aa	Known RBP	4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TFAP2C	Q92754	450 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	DPF2	Q92785	391 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TBCB	Q99426	244 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	C22orf23	Q9BZE7	217 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MAF1	Q9H063	256 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SPON1	Q9HCB6	807 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	STARD7	Q9NQZ5	370 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SLC2A4RG	Q9NR83	387 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	GPRC5B	Q9NZH0	403 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FAM30A	Q9NZY2	134 aa		4.18	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RHPN2P1	A8MT19	583 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267		F5H423	210 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TBX3	O15119	743 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FOXN1	O15353	648 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	AKR1B10	O60218	316 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FAM20B	O75063	409 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PIK3CB	P42338	1070 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PRIM2	P49643	509 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SEPT2	Q15019	361 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	NOMO1	Q15155	1222 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms