RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 LZTS1Q9Y250 596 aa16.92■□□□□ 0.3
SH3TC1-223ENST00000513495 SSX2IPQ9Y2D8 614 aa16.92■□□□□ 0.3
SH3TC1-223ENST00000513495 CST3P01034 146 aaPredicted RBP16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 LINC00271P0C7V0 271 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 ATP1A3P13637 1013 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 USP41Q3LFD5 358 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 WDR72Q3MJ13 1102 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 SUSD3Q96L08 255 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 MMS19Q96T76 1030 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 DNAI2Q9GZS0 605 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 HSD3B7Q9H2F3 369 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 ZNF576Q9H609 170 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 CERS4Q9HA82 394 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 MARCH5Q9NX47 278 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 GCNT4Q9P109 453 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 COQ4Q9Y3A0 265 aa16.91■□□□□ 0.3
SH3TC1-223ENST00000513495 LRRC10BA6NIK2 292 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 LGALS16A8MUM7 142 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 H3BNC9 293 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 PPEF2O14830 753 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 SYN3O14994 580 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 CBFA2T2O43439 604 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 VNN1O95497 513 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 ASS1P00966 412 aaKnown RBP16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 SOD2P04179 222 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 ITGB1P05556 798 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 URODP06132 367 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 TRIM21P19474 475 aaKnown RBP16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 CA8P35219 290 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 UBXN1Q04323 297 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 PTPROQ16827 1216 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 EXOC3L4Q17RC7 722 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 MIIPQ5JXC2 388 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 FAM171A1Q5VUB5 890 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 CEP57Q86XR8 500 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 C3orf58Q8NDZ4 430 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 CXorf38Q8TB03 319 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 FAXDC2Q96IV6 333 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 FAM81BQ96LP2 452 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 PCMTD1Q96MG8 357 aaPredicted RBP16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 NT5C1BQ96P26 610 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 HERC2P3Q9BVR0 1158 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 LMAN2LQ9H0V9 348 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 VRTNQ9H8Y1 702 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 GDAP2Q9NXN4 497 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 NXF1Q9UBU9 619 aaKnown RBP16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 PCDHB8Q9UN66 801 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 SNX9Q9Y5X1 595 aa16.9■□□□□ 0.3
SH3TC1-223ENST00000513495 CYB561D2O14569 222 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 ARHGEF15O94989 841 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 BRCC3P46736 316 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 GLUD2P49448 558 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 AARSP49588 968 aaKnown RBP eCLIP16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 NOP14P78316 857 aaKnown RBP16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 FANCCQ00597 558 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 PLCB2Q00722 1185 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 CREMQ03060 361 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 TIGD5Q53EQ6 642 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 PDE12Q6L8Q7 609 aaKnown RBP16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 DPH6Q7L8W6 267 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 TMEM173Q86WV6 379 aaPredicted RBP16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 VPS52Q8N1B4 723 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 TOP6BLQ8N6T0 577 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 EHBP1Q8NDI1 1231 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 MICAL1Q8TDZ2 1067 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 BCL7CQ8WUZ0 217 aaPredicted RBP16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 SENP8Q96LD8 212 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 TTPALQ9BTX7 342 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 NIF3L1Q9GZT8 377 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 ALG13Q9NP73 1137 aaKnown RBP16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 ENTPD7Q9NQZ7 604 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 TLR9Q9NR96 1032 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 SCN1AP35498 2009 aa16.89■□□□□ 0.29
SH3TC1-223ENST00000513495 F8W810 466 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 H7C4K7 107 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 I3L4J1 428 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 M0QZQ0 153 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 TBXAS1P24557 533 aaPredicted RBP16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 UBASH3AP57075 661 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 YWHAEP62258 255 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 HABP4Q5JVS0 413 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 GPR153Q6NV75 609 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 TMC7Q7Z402 723 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 THEM5Q8N1Q8 247 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 TMEM86AQ8N2M4 240 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 TTC39CQ8N584 583 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 SPATA18Q8TC71 538 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 POF1BQ8WVV4 589 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 CRACR2AQ9BSW2 395 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 PI4K2AQ9BTU6 479 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 INTS2Q9H0H0 1204 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 XYLT2Q9H1B5 865 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 RBSNQ9H1K0 784 aa16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 NGRNQ9NPE2 291 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 MRPL17Q9NRX2 175 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-223ENST00000513495 SPTLC1O15269 473 aa16.87■□□□□ 0.29
SH3TC1-223ENST00000513495 FAM163BP0C2L3 166 aa16.87■□□□□ 0.29
SH3TC1-223ENST00000513495 TYMPP19971 482 aa16.87■□□□□ 0.29
SH3TC1-223ENST00000513495 FGFR3P22607 806 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms