RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 MICALL1Q8N3F8 863 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 C1orf127Q8N9H9 656 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 PARD3BQ8TEW8 1205 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 B3GALT6Q96L58 329 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 MED15Q96RN5 788 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 GPR62Q9BZJ7 368 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 ENTPD7Q9NQZ7 604 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 TLR9Q9NR96 1032 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 NUB1Q9Y5A7 615 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 TNNC2P02585 160 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 TRIM49P0CI25 452 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 TRIM49CP0CI26 452 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 KRT13P13646 458 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 LRPAP1P30533 357 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 RPL9P32969 192 aaKnown RBP17.76■□□□□ 0.43
HMGCL-209ENST00000513148 IRS1P35568 1242 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 BRCC3P46736 316 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 CAMK1Q14012 370 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 C9orf57Q5W0N0 161 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 SCARA3Q6AZY7 606 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 DCLRE1AQ6PJP8 1040 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 C11orf57Q6ZUT1 292 aaPredicted RBP17.76■□□□□ 0.43
HMGCL-209ENST00000513148 TAS1R1Q7RTX1 841 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 DDX53Q86TM3 631 aaKnown RBP17.76■□□□□ 0.43
HMGCL-209ENST00000513148 ZC3H3Q8IXZ2 948 aaKnown RBP17.76■□□□□ 0.43
HMGCL-209ENST00000513148 MICAL1Q8TDZ2 1067 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 MMRN2Q9H8L6 949 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 ANO10Q9NW15 660 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 SF3B1O75533 1304 aaKnown RBP eCLIP17.76■□□□□ 0.43
HMGCL-209ENST00000513148 POLR2BP30876 1174 aaKnown RBP17.76■□□□□ 0.43
HMGCL-209ENST00000513148 VAMP7P51809 220 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 ERVFC1P60507 584 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 BFSP1Q12934 665 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 DUOXA2Q1HG44 320 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 PLPP4Q5VZY2 271 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 INTS8Q75QN2 995 aaKnown RBP17.76■□□□□ 0.43
HMGCL-209ENST00000513148 TMC7Q7Z402 723 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 AUTS2Q8WXX7 1259 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 TCF25Q9BQ70 676 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 MKNK1Q9BUB5 465 aa17.76■□□□□ 0.43
HMGCL-209ENST00000513148 SRRTQ9BXP5 876 aaKnown RBP17.76■□□□□ 0.43
HMGCL-209ENST00000513148 SCN1AP35498 2009 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 C2CD2LO14523 706 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 MAPK13O15264 365 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 SLC16A3O15427 465 aaKnown RBP17.75■□□□□ 0.43
HMGCL-209ENST00000513148 CHRM1P11229 460 aaPredicted RBP17.75■□□□□ 0.43
HMGCL-209ENST00000513148 FOSL2P15408 326 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 UBE3AQ05086 875 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 PTPROQ16827 1216 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 CCDC40Q4G0X9 1142 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 DCAF17Q5H9S7 520 aaPredicted RBP17.75■□□□□ 0.43
HMGCL-209ENST00000513148 CD300LGQ6UXG3 332 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 LUZP1Q86V48 1076 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 CEP57Q86XR8 500 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 ZNF516Q92618 1163 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 MRPL38Q96DV4 380 aaKnown RBP17.75■□□□□ 0.43
HMGCL-209ENST00000513148 CEP63Q96MT8 703 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 DNAJC25Q9H1X3 360 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 ZNF446Q9NWS9 450 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 AGAP1Q9UPQ3 857 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 LZTS1Q9Y250 596 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 FHOD1Q9Y613 1164 aa17.75■□□□□ 0.43
HMGCL-209ENST00000513148 TMEM189-UBE2V1I3L0A0 370 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 FAM171A1Q5VUB5 890 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 TCERG1LQ5VWI1 586 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 ITGA11Q9UKX5 1188 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.74■□□□□ 0.43
HMGCL-209ENST00000513148 ERCC5P28715 1186 aaPredicted RBP17.74■□□□□ 0.43
HMGCL-209ENST00000513148 BIRC3Q13489 604 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 TRAPPC11Q7Z392 1133 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 USP37Q86T82 979 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 TMC2Q8TDI7 906 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 LMAN2LQ9H0V9 348 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 ZBP1Q9H171 429 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 ARMCX3Q9UH62 379 aaPredicted RBP17.74■□□□□ 0.43
HMGCL-209ENST00000513148 SIX4Q9UIU6 781 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 MTCH2Q9Y6C9 303 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 VWA8A3KMH1 1905 aa17.74■□□□□ 0.43
HMGCL-209ENST00000513148 ANO9A1A5B4 782 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 PIRO00625 290 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 PHACTR2O75167 634 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 CLSTN1O94985 981 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 SOD2P04179 222 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 TPM1P09493 284 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 ANO6Q4KMQ2 910 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 HSP90AA4PQ58FG1 418 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 C1orf220Q5T0J3 134 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 KIAA1841Q6NSI8 718 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 FOXR2Q6PJQ5 311 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 FILIP1Q7Z7B0 1213 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 BORCS6Q96GS4 357 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 MYO7AQ13402 2215 aa17.73■□□□□ 0.43
HMGCL-209ENST00000513148 PRRC2BQ5JSZ5 2229 aaKnown RBP17.73■□□□□ 0.43
HMGCL-209ENST00000513148 GCLMP48507 274 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 GSDMDP57764 484 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 LILRA4P59901 499 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 GPS2Q13227 327 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 ELF2Q15723 593 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 TIGD5Q53EQ6 642 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 TDRD10Q5VZ19 366 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms