RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 C3orf58Q8NDZ4 430 aa13.46□□□□□ -0.25
PDPN-210ENST00000513143 NEK11Q8NG66 645 aa13.46□□□□□ -0.25
PDPN-210ENST00000513143 ANP32BQ92688 251 aaKnown RBP13.46□□□□□ -0.25
PDPN-210ENST00000513143 ELMO3Q96BJ8 720 aa13.46□□□□□ -0.25
PDPN-210ENST00000513143 IQCDQ96DY2 449 aa13.46□□□□□ -0.25
PDPN-210ENST00000513143 RAD9AQ99638 391 aa13.46□□□□□ -0.25
PDPN-210ENST00000513143 ZBED2Q9BTP6 218 aa13.46□□□□□ -0.25
PDPN-210ENST00000513143 EDEM3Q9BZQ6 932 aa13.46□□□□□ -0.25
PDPN-210ENST00000513143 TTYH3Q9C0H2 523 aa13.46□□□□□ -0.25
PDPN-210ENST00000513143 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.46□□□□□ -0.25
PDPN-210ENST00000513143 GDAP2Q9NXN4 497 aa13.46□□□□□ -0.25
PDPN-210ENST00000513143 HCSTQ9UBK5 93 aa13.46□□□□□ -0.25
PDPN-210ENST00000513143 DAAM1Q9Y4D1 1078 aa13.46□□□□□ -0.25
PDPN-210ENST00000513143 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.46□□□□□ -0.25
PDPN-210ENST00000513143 KPNA7A9QM74 516 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 NRP1O14786 923 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 SPTLC1O15269 473 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 B3GAT3O94766 335 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 GALTP07902 379 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 TRIM21P19474 475 aaKnown RBP13.45□□□□□ -0.26
PDPN-210ENST00000513143 RFX1P22670 979 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 IGFBP6P24592 240 aaPredicted RBP13.45□□□□□ -0.26
PDPN-210ENST00000513143 OR1G1P47890 313 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 SLC11A1P49279 550 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 AARSP49588 968 aaKnown RBP eCLIP13.45□□□□□ -0.26
PDPN-210ENST00000513143 BCAR1P56945 870 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 GCNT1Q02742 428 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 TBX2Q13207 712 aaPredicted RBP13.45□□□□□ -0.26
PDPN-210ENST00000513143 TRIM14Q14142 442 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 WDR72Q3MJ13 1102 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 ZNF667Q5HYK9 610 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 GJB7Q6PEY0 223 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 TMC6Q7Z403 805 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 RABGGTAQ92696 567 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 FAM81BQ96LP2 452 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 NAA15Q9BXJ9 866 aaKnown RBP13.45□□□□□ -0.26
PDPN-210ENST00000513143 NIF3L1Q9GZT8 377 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 UBE2TQ9NPD8 197 aaPredicted RBP13.45□□□□□ -0.26
PDPN-210ENST00000513143 CEP72Q9P209 647 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 FAN1Q9Y2M0 1017 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 FHOD1Q9Y613 1164 aa13.45□□□□□ -0.26
PDPN-210ENST00000513143 A0A1W2PQJ5 194 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 CARNS1A5YM72 827 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 TLL1O43897 1013 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 KIF4AO95239 1232 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 GYPCP04921 128 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 P4HA1P13674 534 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 TBXAS1P24557 533 aaPredicted RBP13.44□□□□□ -0.26
PDPN-210ENST00000513143 ASPAP45381 313 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 POLR2FP61218 127 aaKnown RBP13.44□□□□□ -0.26
PDPN-210ENST00000513143 IQCEQ6IPM2 695 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 RRAGAQ7L523 313 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 ENOSF1Q7L5Y1 443 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 LIMS2Q7Z4I7 341 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 DRC7Q8IY82 874 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 PPM1KQ8N3J5 372 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 JAKMIP2Q96AA8 810 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 KREMEN1Q96MU8 473 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 COLEC11Q9BWP8 271 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 BCO2Q9BYV7 579 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 NXF1Q9UBU9 619 aaKnown RBP13.44□□□□□ -0.26
PDPN-210ENST00000513143 DNAJC12Q9UKB3 198 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 AJAP1Q9UKB5 411 aaPredicted RBP13.44□□□□□ -0.26
PDPN-210ENST00000513143 CAPN11Q9UMQ6 739 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 POLIQ9UNA4 740 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 MRPL42Q9Y6G3 142 aaKnown RBP13.44□□□□□ -0.26
PDPN-210ENST00000513143 NLRC5Q86WI3 1866 aa13.44□□□□□ -0.26
PDPN-210ENST00000513143 F8W810 466 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 RNF225M0QZC1 329 aaPredicted RBP13.43□□□□□ -0.26
PDPN-210ENST00000513143 CLSTN1O94985 981 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 ITGB1P05556 798 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 LINC00271P0C7V0 271 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 LAG3P18627 525 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 ALDH7A1P49419 539 aaKnown RBP13.43□□□□□ -0.26
PDPN-210ENST00000513143 MFAP3P55082 362 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 TNNC1P63316 161 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 CUL2Q13617 745 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 TIGD5Q53EQ6 642 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 SPOUT1Q5T280 376 aaKnown RBP13.43□□□□□ -0.26
PDPN-210ENST00000513143 SMYD5Q6GMV2 418 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 KCNT2Q6UVM3 1135 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 PPFIBP1Q86W92 1011 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 FIBCD1Q8N539 461 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 CLP1Q92989 425 aaKnown RBP13.43□□□□□ -0.26
PDPN-210ENST00000513143 KAT5Q92993 513 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 PDLIM2Q96JY6 352 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 STK33Q9BYT3 514 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 FAM124BQ9H5Z6 455 aaPredicted RBP13.43□□□□□ -0.26
PDPN-210ENST00000513143 CYP3A43Q9HB55 503 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 NLRC4Q9NPP4 1024 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 MARCH5Q9NX47 278 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 IMPACTQ9P2X3 320 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 PRG3Q9Y2Y8 225 aaPredicted RBP13.43□□□□□ -0.26
PDPN-210ENST00000513143 SNX9Q9Y5X1 595 aa13.43□□□□□ -0.26
PDPN-210ENST00000513143 LAMA2P24043 3122 aaKnown RBP13.43□□□□□ -0.26
PDPN-210ENST00000513143 GRXCR1A8MXD5 290 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 M0QZQ0 153 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 TADA2AO75478 443 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 FAM163BP0C2L3 166 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms