RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 PEX3P56589 373 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 SH3BP2P78314 561 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 ITGB3BPQ13352 177 aaPredicted RBP10.2□□□□□ -0.78
MSH3-203ENST00000512531 LONRF2Q1L5Z9 754 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 NBPF20Q3BBV1 942 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 ZC2HC1CQ53FD0 456 aaPredicted RBP10.2□□□□□ -0.78
MSH3-203ENST00000512531 ZNF572Q7Z3I7 529 aaPredicted RBP10.2□□□□□ -0.78
MSH3-203ENST00000512531 BPHLQ86WA6 291 aaPredicted RBP10.2□□□□□ -0.78
MSH3-203ENST00000512531 HERC6Q8IVU3 1022 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 MMGT1Q8N4V1 131 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.2□□□□□ -0.78
MSH3-203ENST00000512531 AFAP1L1Q8TED9 768 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.2□□□□□ -0.78
MSH3-203ENST00000512531 FAM122AQ96E09 287 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 CAPZA3Q96KX2 299 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 OSBPL9Q96SU4 736 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 RHOXF2Q9BQY4 288 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 STRA6Q9BX79 667 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 LACRTQ9GZZ8 138 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 INTS2Q9H0H0 1204 aaKnown RBP10.2□□□□□ -0.78
MSH3-203ENST00000512531 VIPAS39Q9H9C1 493 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 HSPBP1Q9NZL4 362 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 GABBR1Q9UBS5 961 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 TRIM10Q9UDY6 481 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 DNAJC12Q9UKB3 198 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 IGSF9BQ9UPX0 1349 aa10.2□□□□□ -0.78
MSH3-203ENST00000512531 ZMYM2Q9UBW7 1377 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 SPATA31C2B4DYI2 1134 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 EFCAB14O75071 495 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 ZC3H11AO75152 810 aaKnown RBP eCLIP10.19□□□□□ -0.78
MSH3-203ENST00000512531 CLSTN1O94985 981 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 ZRANB2O95218 330 aaKnown RBP eCLIP10.19□□□□□ -0.78
MSH3-203ENST00000512531 MYL3P08590 195 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 MYOGP15173 224 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 POLGP54098 1239 aaPredicted RBP10.19□□□□□ -0.78
MSH3-203ENST00000512531 JAM2P57087 298 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 BPIFB4P59827 614 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 TAP1Q03518 808 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 TMEM63BQ5T3F8 832 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 KRT39Q6A163 491 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 MAEAQ7L5Y9 396 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 DEFB128Q7Z7B8 93 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 MAP4K3Q8IVH8 894 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 RHOT2Q8IXI1 618 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 IFT20Q8IY31 132 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 TCP11Q8WWU5 503 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 SLC7A3Q8WY07 619 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 BORCS6Q96GS4 357 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 RUFY1Q96T51 708 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 PLVAPQ9BX97 442 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 AZI2Q9H6S1 392 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 MED4Q9NPJ6 270 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 NAGPAQ9UK23 515 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 TBX20Q9UMR3 447 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 FCF1Q9Y324 198 aaKnown RBP10.19□□□□□ -0.78
MSH3-203ENST00000512531 PCDHGC5Q9Y5F6 944 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 FHOD1Q9Y613 1164 aa10.19□□□□□ -0.78
MSH3-203ENST00000512531 GOLGA6L10A0A0M3HER8 536 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 DENND3A2RUS2 1198 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 F8VZ95 297 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 CCDC188H7C350 402 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 FANCGO15287 622 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 CXCL10P02778 98 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 CASP4P49662 377 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 LIG4P49917 911 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 AP3M2P53677 418 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 MAPK7Q13164 816 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 DRAP1Q14919 205 aaPredicted RBP10.18□□□□□ -0.78
MSH3-203ENST00000512531 ENOX2Q16206 610 aaKnown RBP10.18□□□□□ -0.78
MSH3-203ENST00000512531 FAM47CQ5HY64 1035 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 WDR44Q5JSH3 913 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 C8orf74Q6P047 294 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 CCDC62Q6P9F0 684 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 PEX26Q7Z412 305 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 IRF2BP2Q7Z5L9 587 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 GPD1LQ8N335 351 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 IL31RAQ8NI17 732 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 DEPTORQ8TB45 409 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 POMGNT1Q8WZA1 660 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 EMID1Q96A84 441 aaPredicted RBP10.18□□□□□ -0.78
MSH3-203ENST00000512531 NT5C1BQ96P26 610 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 FNBP1Q96RU3 617 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 FIZ1Q96SL8 496 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 CEP89Q96ST8 783 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 NTPCRQ9BSD7 190 aaKnown RBP10.18□□□□□ -0.78
MSH3-203ENST00000512531 TMEM8AQ9HCN3 771 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 ZNF302Q9NR11 478 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 CYP26B1Q9NR63 512 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 SEPT11Q9NVA2 429 aaKnown RBP10.18□□□□□ -0.78
MSH3-203ENST00000512531 AMFRQ9UKV5 643 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 USP20Q9Y2K6 914 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 TANC1Q9C0D5 1861 aa10.18□□□□□ -0.78
MSH3-203ENST00000512531 EMSYQ7Z589 1322 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 A0A087X0T9 212 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 ABHD14A-ACY1A0A1B0GW23 586 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 ANKRD62A6NC57 917 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 ZNF233A6NK53 670 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 TMCO5BA8MYB1 307 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms