RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 KIAA0391O15091 583 aaKnown RBP12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 POU2F2P09086 479 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 NDUFA8P51970 172 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 ZXDAP98168 799 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 PTPN21Q16825 1174 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 BMT2Q1RMZ1 405 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 PPM1LQ5SGD2 360 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 ZNF280DQ6N043 979 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 RTL10Q7L3V2 364 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 OTOP3Q7RTS5 596 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 GPD1LQ8N335 351 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 SLC7A14Q8TBB6 771 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 PIDD1Q9HB75 910 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 RBAKQ9NYW8 714 aaPredicted RBP12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 LIMD1Q9UGP4 676 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 MYO10Q9HD67 2058 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 UBE4BO95155 1302 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 TRIOO75962 3097 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 CCL16O15467 120 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 TYMPP19971 482 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 PAX3P23760 479 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 SYKP43405 635 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 ARPP19P56211 112 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 NUCB2P80303 420 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 YWHAHQ04917 246 aaPredicted RBP12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 DSTYKQ6XUX3 929 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 ACSF2Q96CM8 615 aaPredicted RBP12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 BORCS6Q96GS4 357 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 SENP8Q96LD8 212 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 GOLPH3LQ9H4A5 285 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 PDE11AQ9HCR9 933 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 SLC39A2Q9NP94 309 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 AGPAT3Q9NRZ7 376 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 HSPBP1Q9NZL4 362 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 DOCK6Q96HP0 2047 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 ARHGEF37A1IGU5 675 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 PRR33A8MZF0 331 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 SEC24AO95486 1093 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 ASGR2P07307 311 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 ATF2P15336 505 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 SNRPFP62306 86 aaKnown RBP12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 KMT5BQ4FZB7 885 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 TPGS2Q68CL5 300 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 SCARA3Q6AZY7 606 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 TRIM67Q6ZTA4 783 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 GRASPQ7Z6J2 395 aaPredicted RBP12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 CBWD2Q8IUF1 395 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 TCEAL8Q8IYN2 117 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 FSIP1Q8NA03 581 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 CXorf38Q8TB03 319 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 FAM84AQ96KN4 292 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 MYADMQ96S97 322 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 SCN1AP35498 2009 aa12.56□□□□□ -0.4
SH3RF1-205ENST00000511421 VNN2O95498 520 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 CYP11A1P05108 521 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 MYL1P05976 194 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 TAF6P49848 677 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 NTHL1P78549 312 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 TFAMQ00059 246 aaKnown RBP12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 STK4Q13043 487 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 OVOS1Q6IE37 1185 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 USP37Q86T82 979 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 C1orf127Q8N9H9 656 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 KIAA0895Q8NCT3 520 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 OXCT2Q9BYC2 517 aaPredicted RBP12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 EPS15L1Q9UBC2 864 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 AFF4Q9UHB7 1163 aaKnown RBP12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 SORCS3Q9UPU3 1222 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 DOCK8Q8NF50 2099 aa12.55□□□□□ -0.4
SH3RF1-205ENST00000511421 ZNF233A6NK53 670 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 OR6C75A6NL08 312 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 CLIC2O15247 247 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 XYLBO75191 536 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 OR4Q2P0C623 313 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 PRR29P0C7W0 189 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 ODC1P11926 461 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 COL9A1P20849 921 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 GBP2P32456 591 aaPredicted RBP12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 ELF1P32519 619 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 KNOP1Q1ED39 458 aaKnown RBP12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 RNF19BQ6ZMZ0 732 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 C12orf56Q8IXR9 622 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 NOC3LQ8WTT2 800 aaKnown RBP12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 CACTINQ8WUQ7 758 aaKnown RBP12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 SMOC2Q9H3U7 446 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 CYP4F11Q9HBI6 524 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 KIAA1586Q9HCI6 787 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 EXOC1Q9NV70 894 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 HCFC1R1Q9NWW0 138 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 DNMT3BQ9UBC3 853 aaKnown RBP12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 PTPRJQ12913 1337 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 TMEM221A6NGB7 291 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 M0R296 226 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 CYB561D2O14569 222 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 ZNF202O95125 648 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 ITGB3P05106 788 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 CPB1P15086 417 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms