RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 LURAP1LQ8IV03 231 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 HIPK4Q8NE63 616 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.88□□□□□ -1.31
GYPB-212ENST00000511198 UBXN4Q92575 508 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 SLC28A3Q9HAS3 691 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 TMEM260Q9NX78 707 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 SPEGQ15772 3267 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 ZZEF1O43149 2961 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 KMT2EQ8IZD2 1858 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 RPAP1Q9BWH6 1393 aaPredicted RBP6.87□□□□□ -1.31
GYPB-212ENST00000511198 A0A0G2JNJ9 132 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 B4E1Z4 1266 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 DVL2O14641 736 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 HIP1RO75146 1068 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 ASLP04424 464 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 SDSP20132 328 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 CYP2B6P20813 491 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 RAC3P60763 192 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 TLE2Q04725 743 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 NFYCQ13952 458 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 ZNF460Q14592 562 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 RAB30Q15771 203 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 ARHGAP44Q17R89 818 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 CC2D1AQ6P1N0 951 aaPredicted RBP6.87□□□□□ -1.31
GYPB-212ENST00000511198 DDX53Q86TM3 631 aaKnown RBP6.87□□□□□ -1.31
GYPB-212ENST00000511198 RTN4RL1Q86UN2 441 aaPredicted RBP6.87□□□□□ -1.31
GYPB-212ENST00000511198 ADSSL1Q8N142 457 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 ANKRD13CQ8N6S4 541 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 KIAA1683Q9H0B3 1180 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 DEF6Q9H4E7 631 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 PIF1Q9H611 641 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 TLR9Q9NR96 1032 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 Q9UFV3 132 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 MSRAQ9UJ68 235 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 ZFR2Q9UPR6 939 aaKnown RBP6.87□□□□□ -1.31
GYPB-212ENST00000511198 TNPO3Q9Y5L0 923 aaKnown RBP6.87□□□□□ -1.31
GYPB-212ENST00000511198 SPTBN2O15020 2390 aa6.87□□□□□ -1.31
GYPB-212ENST00000511198 EPOPA6NHQ4 379 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 DNM1LO00429 736 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 KIAA0355O15063 1070 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 MYOGP15173 224 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 SELENOPP49908 381 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 DUSP8Q13202 625 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 ZNF568Q3ZCX4 644 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 TMEM240Q5SV17 173 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 OTOP2Q7RTS6 562 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 SPRED1Q7Z699 444 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 BCL6BQ8N143 479 aaPredicted RBP6.86□□□□□ -1.31
GYPB-212ENST00000511198 CFHR4Q92496 578 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 FSD1Q9BTV5 496 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 ZNF70Q9UC06 446 aaPredicted RBP6.86□□□□□ -1.31
GYPB-212ENST00000511198 OAZ3Q9UMX2 235 aa6.86□□□□□ -1.31
GYPB-212ENST00000511198 MED23Q9ULK4 1368 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 XDHP47989 1333 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 CEP250Q9BV73 2442 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.85□□□□□ -1.31
GYPB-212ENST00000511198 TCP10L2B9ZVM9 353 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 OPA1O60313 960 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 MAFO75444 373 aaPredicted RBP6.85□□□□□ -1.31
GYPB-212ENST00000511198 RFPL3O75679 317 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 CR2P20023 1033 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 PCOLCEQ15113 449 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 CCL14Q16627 93 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 GJC2Q5T442 439 aaPredicted RBP6.85□□□□□ -1.31
GYPB-212ENST00000511198 AGBL4Q5VU57 503 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 GRAMD4Q6IC98 578 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 FILIP1Q7Z7B0 1213 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 PALM2Q8IXS6 379 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 CHST14Q8NCH0 376 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 GIMAP8Q8ND71 665 aaPredicted RBP6.85□□□□□ -1.31
GYPB-212ENST00000511198 WDR48Q8TAF3 677 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 SH3RF3Q8TEJ3 882 aaPredicted RBP6.85□□□□□ -1.31
GYPB-212ENST00000511198 CDK5RAP1Q96SZ6 601 aaKnown RBP6.85□□□□□ -1.31
GYPB-212ENST00000511198 DPYSL5Q9BPU6 564 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 COA1Q9GZY4 146 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 TDRD3Q9H7E2 651 aaKnown RBP6.85□□□□□ -1.31
GYPB-212ENST00000511198 NR2E1Q9Y466 385 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 TCAF1Q9Y4C2 921 aa6.85□□□□□ -1.31
GYPB-212ENST00000511198 EP300Q09472 2414 aaPredicted RBP6.85□□□□□ -1.31
GYPB-212ENST00000511198 ARAP2Q8WZ64 1704 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 ARHGAP6O43182 974 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 ASMTLO95671 621 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 APEX1P27695 318 aaKnown RBP6.84□□□□□ -1.31
GYPB-212ENST00000511198 NBL1P41271 181 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 FNTBP49356 437 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 RABGGTBP53611 331 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 VCPP55072 806 aaKnown RBP6.84□□□□□ -1.31
GYPB-212ENST00000511198 ALDH6A1Q02252 535 aaKnown RBP6.84□□□□□ -1.31
GYPB-212ENST00000511198 LEXMQ3ZCV2 418 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 USP30Q70CQ3 517 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 FUKQ8N0W3 1084 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 CALML6Q8TD86 181 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 LPAR1Q92633 364 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 ERCC4Q92889 916 aaPredicted RBP6.84□□□□□ -1.31
GYPB-212ENST00000511198 FAM89AQ96GI7 184 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 FOXB1Q99853 325 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 THUMPD2Q9BTF0 503 aaKnown RBP6.84□□□□□ -1.31
GYPB-212ENST00000511198 TESMINQ9Y4I5 508 aa6.84□□□□□ -1.31
GYPB-212ENST00000511198 PTPDC1A2A3K4 754 aa6.83□□□□□ -1.32
GYPB-212ENST00000511198 CXCL11O14625 94 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms