RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 SH3BP1Q9Y3L3 701 aa6.85□□□□□ -1.31
CHD1-206ENST00000511067 TRIM43BA6NCK2 446 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 NPEPPSL1A6NEC2 478 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 ABHD16AO95870 558 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 TSHRP16473 764 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 TNFSF4P23510 183 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 STT3AP46977 705 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 MXRA7P84157 204 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 SLC44A4Q53GD3 710 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 TCTN3Q6NUS6 607 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 POLNQ7Z5Q5 900 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 SESTD1Q86VW0 696 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 FUKQ8N0W3 1084 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 D2HGDHQ8N465 521 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 TRIM43Q96BQ3 446 aaPredicted RBP6.84□□□□□ -1.31
CHD1-206ENST00000511067 MIEF2Q96C03 454 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 CPEB1Q9BZB8 566 aaKnown RBP6.84□□□□□ -1.31
CHD1-206ENST00000511067 GSTO2Q9H4Y5 243 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 STK32BQ9NY57 414 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 CPNE7Q9UBL6 633 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 SRRDQ9UH36 339 aa6.84□□□□□ -1.31
CHD1-206ENST00000511067 ZNF536O15090 1300 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 BTN3A1O00481 513 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 MSX2P35548 267 aaPredicted RBP6.83□□□□□ -1.32
CHD1-206ENST00000511067 POU6F2P78424 691 aaPredicted RBP6.83□□□□□ -1.32
CHD1-206ENST00000511067 FOXL1Q12952 345 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 RAB32Q13637 225 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 TBC1D10BQ4KMP7 808 aaPredicted RBP6.83□□□□□ -1.32
CHD1-206ENST00000511067 IZUMO3Q5VZ72 239 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 TTLL10Q6ZVT0 673 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 OR10H5Q8NGA6 315 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 FEZF2Q8TBJ5 459 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 BRI3BPQ8WY22 251 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 BRIP1Q9BX63 1249 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 ZNF518BQ9C0D4 1074 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 SMURF2Q9HAU4 748 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 SPON1Q9HCB6 807 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 COL20A1Q9P218 1284 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 FNIP2Q9P278 1114 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 ZFR2Q9UPR6 939 aaKnown RBP6.83□□□□□ -1.32
CHD1-206ENST00000511067 PLEKHM1Q9Y4G2 1056 aa6.83□□□□□ -1.32
CHD1-206ENST00000511067 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.83□□□□□ -1.32
CHD1-206ENST00000511067 CDHR4A6H8M9 788 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 POM121BA6NF01 834 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 TBC1D4O60343 1298 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 BMP7P18075 431 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 PHKA1P46020 1223 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 HHEXQ03014 270 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 TCF15Q12870 199 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 SLC13A2Q13183 592 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 CSRP2Q16527 193 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 UTP14CQ5TAP6 766 aaKnown RBP6.82□□□□□ -1.32
CHD1-206ENST00000511067 LMBRD2Q68DH5 695 aaPredicted RBP6.82□□□□□ -1.32
CHD1-206ENST00000511067 NAIF1Q69YI7 327 aaPredicted RBP6.82□□□□□ -1.32
CHD1-206ENST00000511067 C1orf228Q6PIY5 440 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 HTR3DQ70Z44 454 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 CIR1Q86X95 450 aaPredicted RBP6.82□□□□□ -1.32
CHD1-206ENST00000511067 ELOA2Q8IYF1 753 aaPredicted RBP6.82□□□□□ -1.32
CHD1-206ENST00000511067 RNF169Q8NCN4 708 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 NUP133Q8WUM0 1156 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 MAML1Q92585 1016 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 TINAGL1Q9GZM7 467 aaPredicted RBP6.82□□□□□ -1.32
CHD1-206ENST00000511067 XYLT2Q9H1B5 865 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 ARFGAP3Q9NP61 516 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 SERHLQ9NQF3 203 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 SACM1LQ9NTJ5 587 aa6.82□□□□□ -1.32
CHD1-206ENST00000511067 TRMT13Q9NUP7 481 aaKnown RBP6.82□□□□□ -1.32
CHD1-206ENST00000511067 ZNF785A8K8V0 405 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 DNAJB5O75953 348 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 AGFG2O95081 481 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 PARP1P09874 1014 aaKnown RBP6.81□□□□□ -1.32
CHD1-206ENST00000511067 PSMC1P62191 440 aaKnown RBP6.81□□□□□ -1.32
CHD1-206ENST00000511067 GRAMD1BQ3KR37 738 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 FAM209BQ5JX69 171 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 FAM83BQ5T0W9 1011 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 UBXN11Q5T124 520 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 GLB1LQ6UWU2 654 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 TSHZ1Q6ZSZ6 1077 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 CERS3Q8IU89 383 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 RNF152Q8N8N0 203 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 TEPSINQ96N21 525 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 REXO4Q9GZR2 422 aaKnown RBP6.81□□□□□ -1.32
CHD1-206ENST00000511067 CERS4Q9HA82 394 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 POGKQ9P215 609 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 RAPGEFL1Q9UHV5 662 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 SLC45A2Q9UMX9 530 aa6.81□□□□□ -1.32
CHD1-206ENST00000511067 A0A087WWL8 130 aa6.8□□□□□ -1.32
CHD1-206ENST00000511067 MBD3L4A6NDZ8 208 aaPredicted RBP6.8□□□□□ -1.32
CHD1-206ENST00000511067 MBD3L3A6NE82 208 aaPredicted RBP6.8□□□□□ -1.32
CHD1-206ENST00000511067 DRGXA6NNA5 263 aa6.8□□□□□ -1.32
CHD1-206ENST00000511067 F8W8V4 182 aa6.8□□□□□ -1.32
CHD1-206ENST00000511067 CYP27B1O15528 508 aa6.8□□□□□ -1.32
CHD1-206ENST00000511067 GPR42O15529 346 aa6.8□□□□□ -1.32
CHD1-206ENST00000511067 FOXS1O43638 330 aa6.8□□□□□ -1.32
CHD1-206ENST00000511067 UNC5CO95185 931 aa6.8□□□□□ -1.32
CHD1-206ENST00000511067 ITGB1P05556 798 aa6.8□□□□□ -1.32
CHD1-206ENST00000511067 GCSHP23434 173 aa6.8□□□□□ -1.32
CHD1-206ENST00000511067 SLC6A2P23975 617 aa6.8□□□□□ -1.32
CHD1-206ENST00000511067 ZNF135P52742 658 aaPredicted RBP6.8□□□□□ -1.32
CHD1-206ENST00000511067 RPS16P62249 146 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms