RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 EPB42P16452 691 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 NPTX2P47972 431 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 PEX3P56589 373 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 DAB2P98082 770 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 MAPK7Q13164 816 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 BMS1Q14692 1282 aaKnown RBP9.46□□□□□ -0.9
PDPN-209ENST00000510906 PPP2R5AQ15172 486 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 NT5DC1Q5TFE4 455 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 SUSD6Q92537 303 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 RABGGTAQ92696 567 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 CASP10Q92851 521 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 IFT74Q96LB3 600 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 POP1Q99575 1024 aaKnown RBP9.46□□□□□ -0.9
PDPN-209ENST00000510906 CXCL16Q9H2A7 254 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 CACNG4Q9UBN1 327 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 FNDC3AQ9Y2H6 1198 aaKnown RBP9.46□□□□□ -0.9
PDPN-209ENST00000510906 IRAK3Q9Y616 596 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 EPG5Q9HCE0 2579 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 KMT2BQ9UMN6 2715 aaPredicted RBP9.45□□□□□ -0.9
PDPN-209ENST00000510906 VPS37CA5D8V6 355 aaPredicted RBP9.45□□□□□ -0.9
PDPN-209ENST00000510906 CCDC169A6NNP5 214 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 PTGESO14684 152 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 DCXO43602 365 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 RECQL4O94761 1208 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 EPCAMP16422 314 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 HOXB8P17481 243 aaPredicted RBP9.45□□□□□ -0.9
PDPN-209ENST00000510906 MRE11P49959 708 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 EFNA5P52803 228 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 GRIN1Q05586 938 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 RAD51AP2Q09MP3 1159 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 GRIK3Q13003 919 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 CBX2Q14781 532 aaPredicted RBP9.45□□□□□ -0.9
PDPN-209ENST00000510906 TMEM31Q5JXX7 168 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 HYIQ5T013 277 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 ARL6IP4Q66PJ3 421 aaKnown RBP9.45□□□□□ -0.9
PDPN-209ENST00000510906 RINT1Q6NUQ1 792 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 KANK3Q6NY19 840 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 C1orf186Q6ZWK4 172 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 TAS1R1Q7RTX1 841 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 BRAPQ7Z569 592 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 PGBD3Q8N328 593 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 C12orf76Q8N812 135 aaPredicted RBP9.45□□□□□ -0.9
PDPN-209ENST00000510906 TMEM87AQ8NBN3 555 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 TTC16Q8NEE8 873 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 FEZF2Q8TBJ5 459 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 SLC22A17Q8WUG5 538 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 RPGRIP1Q96KN7 1286 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 KLHL5Q96PQ7 755 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 LRFN3Q9BTN0 628 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 PHF7Q9BWX1 381 aaPredicted RBP9.45□□□□□ -0.9
PDPN-209ENST00000510906 SNTG2Q9NY99 539 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 MUTYHQ9UIF7 546 aa9.45□□□□□ -0.9
PDPN-209ENST00000510906 LOC730098B7Z3J9 87 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 K7ERI5 159 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 C2CD2LO14523 706 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 ST8SIA5O15466 376 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 EFSO43281 561 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 EFEMP2O95967 443 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 SOD2P04179 222 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 CNPP09543 421 aaKnown RBP9.44□□□□□ -0.9
PDPN-209ENST00000510906 WEE2P0C1S8 567 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 PLA2G4BP0C869 781 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 FAM157BP0CG42 384 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 ALADP13716 330 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 SP100P23497 879 aaPredicted RBP9.44□□□□□ -0.9
PDPN-209ENST00000510906 GUCY2CP25092 1073 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 DMP1Q13316 513 aaPredicted RBP9.44□□□□□ -0.9
PDPN-209ENST00000510906 UBAP2LQ14157 1087 aaKnown RBP9.44□□□□□ -0.9
PDPN-209ENST00000510906 GIT2Q14161 759 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 SF3A1Q15459 793 aaKnown RBP9.44□□□□□ -0.9
PDPN-209ENST00000510906 TMEM119Q4V9L6 283 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 RARS2Q5T160 578 aaKnown RBP9.44□□□□□ -0.9
PDPN-209ENST00000510906 ATF7IP2Q5U623 682 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 CABP7Q86V35 215 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 RNF168Q8IYW5 571 aaPredicted RBP9.44□□□□□ -0.9
PDPN-209ENST00000510906 LRRC15Q8TF66 581 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 B3GALT6Q96L58 329 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 DRC1Q96MC2 740 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 CEP63Q96MT8 703 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 RPS6KC1Q96S38 1066 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 PAAF1Q9BRP4 392 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 ADPGKQ9BRR6 497 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 HERC2P3Q9BVR0 1158 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 COLEC11Q9BWP8 271 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 GPR62Q9BZJ7 368 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 BRD7Q9NPI1 651 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 KMT5AQ9NQR1 393 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 MRPL17Q9NRX2 175 aaKnown RBP9.44□□□□□ -0.9
PDPN-209ENST00000510906 ARHGAP28Q9P2N2 729 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 GDAQ9Y2T3 454 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 ZMYM2Q9UBW7 1377 aa9.44□□□□□ -0.9
PDPN-209ENST00000510906 SPTBN4Q9H254 2564 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 PHLPP2Q6ZVD8 1323 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 NPHP3-ACAD11A0A0J9YXS1 232 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 SLC35F4A4IF30 521 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 CASTOR2A6NHX0 329 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 SLC16A4O15374 487 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 MAN1A2O60476 641 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 CPNE3O75131 537 aaKnown RBP9.43□□□□□ -0.9
PDPN-209ENST00000510906 URODP06132 367 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms