RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CYP4F11Q9HBI6 524 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 PSMC3IPQ9P2W1 217 aaPredicted RBP15.72■□□□□ 0.11
USP38-202ENST00000510377 AKAP11Q9UKA4 1901 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 IQANK1A0A1B0GTG1 560 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 MAP3K6O95382 1288 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 FITM2Q8N6M3 262 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 TMEM35BQ8NCS4 154 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 TTC16Q8NEE8 873 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 PAGR1Q9BTK6 254 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 POLR3FQ9H1D9 316 aaPredicted RBP15.71■□□□□ 0.11
USP38-202ENST00000510377 SLC9A2Q9UBY0 812 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 IP6K2Q9UHH9 426 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 YY1P25490 414 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 CYP4A22Q5TCH4 519 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 APOBEC3HQ6NTF7 200 aaKnown RBP15.71■□□□□ 0.11
USP38-202ENST00000510377 ZSWIM2Q8NEG5 633 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 FAM163AQ96GL9 167 aaPredicted RBP15.71■□□□□ 0.11
USP38-202ENST00000510377 AGO2Q9UKV8 859 aaKnown RBP15.71■□□□□ 0.11
USP38-202ENST00000510377 STXBP5LQ9Y2K9 1186 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 MYH7P12883 1935 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 SYNJ2BP-COX16A0A087WUM0 186 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 O00370 1275 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 HOXD13P35453 343 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 UBAP2Q5T6F2 1119 aaKnown RBP15.71■□□□□ 0.11
USP38-202ENST00000510377 TEX2Q8IWB9 1127 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 ART4Q93070 314 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 ZDHHC18Q9NUE0 388 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 COX16Q9P0S2 106 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 TBX20Q9UMR3 447 aa15.71■□□□□ 0.11
USP38-202ENST00000510377 R3HDM2Q9Y2K5 976 aaKnown RBP15.71■□□□□ 0.11
USP38-202ENST00000510377 ENTPD5O75356 428 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 BANF1O75531 89 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 DRG2P55039 364 aaKnown RBP15.7■□□□□ 0.1
USP38-202ENST00000510377 CHADLQ6NUI6 762 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 TSNARE1Q96NA8 513 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 NGRNQ9NPE2 291 aaKnown RBP15.7■□□□□ 0.1
USP38-202ENST00000510377 TBC1D22BQ9NU19 505 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 PARVAQ9NVD7 372 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 INO80B-WBP1J3KQ70 363 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 PECAM1P16284 738 aaPredicted RBP15.7■□□□□ 0.1
USP38-202ENST00000510377 NCF2P19878 526 aaPredicted RBP15.7■□□□□ 0.1
USP38-202ENST00000510377 PDE1BQ01064 536 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 PPP6R3Q5H9R7 873 aaPredicted RBP15.7■□□□□ 0.1
USP38-202ENST00000510377 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.7■□□□□ 0.1
USP38-202ENST00000510377 INO80BQ9C086 356 aaPredicted RBP15.7■□□□□ 0.1
USP38-202ENST00000510377 IFT122Q9HBG6 1241 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 SEPT10Q9P0V9 454 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 CAPN9O14815 690 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 ADRB2P07550 413 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 SSTR1P30872 391 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 ALDH18A1P54886 795 aaKnown RBP15.7■□□□□ 0.1
USP38-202ENST00000510377 FAM111AQ96PZ2 611 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 ZFATQ9P243 1243 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 SUGT1Q9Y2Z0 365 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 GAKO14976 1311 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 ROBO3Q96MS0 1386 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 P4HA2O15460 535 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 MGRN1O60291 552 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 FMO1Q01740 532 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 GRAMD1BQ3KR37 738 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 C1orf228Q6PIY5 440 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 FOXR2Q6PJQ5 311 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 SLC30A9Q6PML9 568 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 BZW1Q7L1Q6 419 aaKnown RBP15.7■□□□□ 0.1
USP38-202ENST00000510377 HSD17B14Q9BPX1 270 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 SHCBP1LQ9BZQ2 653 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 KCND2Q9NZV8 630 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 UBE4BO95155 1302 aa15.7■□□□□ 0.1
USP38-202ENST00000510377 B2RBV5 119 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 NFIBO00712 420 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 CST8O60676 142 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 TNNC2P02585 160 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 SNHG28P0DPA3 235 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 POTEAQ6S8J7 498 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 SPDYE1Q8NFV5 336 aaPredicted RBP15.69■□□□□ 0.1
USP38-202ENST00000510377 CRAMP1Q96RY5 1269 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 SENP7Q9BQF6 1050 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 KIAA1683Q9H0B3 1180 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 A1CFQ9NQ94 594 aaKnown RBP15.69■□□□□ 0.1
USP38-202ENST00000510377 SAE1Q9UBE0 346 aaPredicted RBP15.69■□□□□ 0.1
USP38-202ENST00000510377 DNPEPQ9ULA0 475 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 FRMPD4Q14CM0 1322 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 C5orf60A6NFR6 353 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 H3BRJ5 948 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 KCNA3P22001 575 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 PTGIRP43119 386 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 NPTX2P47972 431 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 CLK2P49760 499 aaKnown RBP15.69■□□□□ 0.1
USP38-202ENST00000510377 RARRES1P49788 294 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 PSMC1P62191 440 aaKnown RBP15.69■□□□□ 0.1
USP38-202ENST00000510377 IRX1P78414 480 aaPredicted RBP15.69■□□□□ 0.1
USP38-202ENST00000510377 THOC5Q13769 683 aaKnown RBP15.69■□□□□ 0.1
USP38-202ENST00000510377 KLHL38Q2WGJ6 581 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 OR6B2Q6IFH4 312 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 THTPAQ9BU02 230 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 VAV3Q9UKW4 847 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
USP38-202ENST00000510377 CYP3A7-CYP3A51PA0A087WV96 503 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 SPECC1L-ADORA2AF8WAN1 911 aa15.69■□□□□ 0.1
USP38-202ENST00000510377 NOP56O00567 594 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms