RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 IER2Q9BTL4 223 aa11.18□□□□□ -0.62
COPS4-207ENST00000509317 LRRC3Q9BY71 257 aa11.18□□□□□ -0.62
COPS4-207ENST00000509317 SMG9Q9H0W8 520 aaKnown RBP11.18□□□□□ -0.62
COPS4-207ENST00000509317 DNAJC25Q9H1X3 360 aa11.18□□□□□ -0.62
COPS4-207ENST00000509317 TRPV4Q9HBA0 871 aa11.18□□□□□ -0.62
COPS4-207ENST00000509317 TUBGCP4Q9UGJ1 667 aa11.18□□□□□ -0.62
COPS4-207ENST00000509317 YIPF1Q9Y548 306 aa11.18□□□□□ -0.62
COPS4-207ENST00000509317 NUB1Q9Y5A7 615 aa11.18□□□□□ -0.62
COPS4-207ENST00000509317 PFKFB2O60825 505 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 CDKL5O76039 1030 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 MICAL2O94851 1124 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 LARGE1O95461 756 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 PRAMEF12O95522 483 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 TOP3BO95985 862 aaKnown RBP11.17□□□□□ -0.62
COPS4-207ENST00000509317 XRCC6P12956 609 aaKnown RBP eCLIP11.17□□□□□ -0.62
COPS4-207ENST00000509317 CPB1P15086 417 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 XBP1P17861 261 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 MCM4P33991 863 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 EPHA5P54756 1037 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 SPAG1Q07617 926 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 LRRC32Q14392 662 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 XKR4Q5GH76 650 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 TAS1R3Q7RTX0 852 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 ARID3BQ8IVW6 561 aaPredicted RBP11.17□□□□□ -0.62
COPS4-207ENST00000509317 TTC9BQ8N6N2 239 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 C12orf50Q8NA57 414 aaPredicted RBP11.17□□□□□ -0.62
COPS4-207ENST00000509317 ZBTB45Q96K62 511 aaPredicted RBP11.17□□□□□ -0.62
COPS4-207ENST00000509317 TBC1D32Q96NH3 1257 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 NACC1Q96RE7 527 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 MKNK1Q9BUB5 465 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 TARS2Q9BW92 718 aaKnown RBP11.17□□□□□ -0.62
COPS4-207ENST00000509317 AFF4Q9UHB7 1163 aaKnown RBP11.17□□□□□ -0.62
COPS4-207ENST00000509317 SLC27A5Q9Y2P5 690 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 FAM208BQ5VWN6 2430 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 AKAP13Q12802 2813 aa11.17□□□□□ -0.62
COPS4-207ENST00000509317 MYBPHLA2RUH7 354 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 H7C4K7 107 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 SYN3O14994 580 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 CHADO15335 359 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 JAK2O60674 1132 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 REC8O95072 547 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 KCNK5O95279 499 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 PAPSS2O95340 614 aaPredicted RBP11.16□□□□□ -0.62
COPS4-207ENST00000509317 GRM5P41594 1212 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 GUCY2FP51841 1108 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 YARSP54577 528 aaKnown RBP11.16□□□□□ -0.62
COPS4-207ENST00000509317 SHC2P98077 582 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 FCHO2Q0JRZ9 810 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 DUSP4Q13115 394 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 CCINQ13939 588 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 TPGS2Q68CL5 300 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 NAIF1Q69YI7 327 aaPredicted RBP11.16□□□□□ -0.62
COPS4-207ENST00000509317 ZNF280DQ6N043 979 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 PSAPL1Q6NUJ1 521 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 CENPQQ7L2Z9 268 aaPredicted RBP11.16□□□□□ -0.62
COPS4-207ENST00000509317 WDR5BQ86VZ2 330 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 DIS3L2Q8IYB7 885 aaKnown RBP11.16□□□□□ -0.62
COPS4-207ENST00000509317 DDX12PQ92771 950 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 SUSD3Q96L08 255 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 TMEM209Q96SK2 561 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 ACO2Q99798 780 aaKnown RBP11.16□□□□□ -0.62
COPS4-207ENST00000509317 CCDC94Q9BW85 323 aaPredicted RBP11.16□□□□□ -0.62
COPS4-207ENST00000509317 BHMT2Q9H2M3 363 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 PTPRHQ9HD43 1115 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 TUFT1Q9NNX1 390 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 TNFSF13BQ9Y275 285 aa11.16□□□□□ -0.62
COPS4-207ENST00000509317 CCDC169A6NNP5 214 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 K7ERI5 159 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 ABLIM1O14639 778 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 DCLK1O15075 740 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 RPP40O75818 363 aaKnown RBP11.15□□□□□ -0.62
COPS4-207ENST00000509317 ZNF806P0C7X5 589 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 U2AF2P26368 475 aaKnown RBP eCLIP11.15□□□□□ -0.62
COPS4-207ENST00000509317 CNR2P34972 360 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 NPTX2P47972 431 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 PEX3P56589 373 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 CYP4F8P98187 520 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 GUCY1B3Q02153 619 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 ZNF174Q15697 407 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 GAREM2Q75VX8 874 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 ATAD1Q8NBU5 361 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 FAM200AQ8TCP9 573 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 GAB3Q8WWW8 586 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 CHFRQ96EP1 664 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 IFT74Q96LB3 600 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 POLR3CQ9BUI4 534 aaPredicted RBP11.15□□□□□ -0.62
COPS4-207ENST00000509317 TM6SF1Q9BZW5 370 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 C8orf33Q9H7E9 229 aaPredicted RBP11.15□□□□□ -0.62
COPS4-207ENST00000509317 BRMS1Q9HCU9 246 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 SH2B1Q9NRF2 756 aaPredicted RBP11.15□□□□□ -0.62
COPS4-207ENST00000509317 ZMIZ1Q9ULJ6 1067 aa11.15□□□□□ -0.62
COPS4-207ENST00000509317 ANKRD11Q6UB99 2663 aaPredicted RBP11.14□□□□□ -0.63
COPS4-207ENST00000509317 OTOL1A6NHN0 477 aaPredicted RBP11.14□□□□□ -0.63
COPS4-207ENST00000509317 PPEF2O14830 753 aa11.14□□□□□ -0.63
COPS4-207ENST00000509317 EPN2O95208 641 aa11.14□□□□□ -0.63
COPS4-207ENST00000509317 PROS1P07225 676 aa11.14□□□□□ -0.63
COPS4-207ENST00000509317 CCDC192P0DO97 292 aa11.14□□□□□ -0.63
COPS4-207ENST00000509317 KCNE1P15382 129 aa11.14□□□□□ -0.63
COPS4-207ENST00000509317 MPLP40238 635 aa11.14□□□□□ -0.63
COPS4-207ENST00000509317 RAP1GAPP47736 663 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms