RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 LDLRAD3Q86YD5 345 aa5.43□□□□□ -1.54
NFKB1-208ENST00000509165 DRC7Q8IY82 874 aa5.43□□□□□ -1.54
NFKB1-208ENST00000509165 CCHCR1Q8TD31 782 aa5.43□□□□□ -1.54
NFKB1-208ENST00000509165 NEU4Q8WWR8 484 aaPredicted RBP5.43□□□□□ -1.54
NFKB1-208ENST00000509165 COA7Q96BR5 231 aa5.43□□□□□ -1.54
NFKB1-208ENST00000509165 MYEOVQ96EZ4 313 aa5.43□□□□□ -1.54
NFKB1-208ENST00000509165 C7orf25Q9BPX7 421 aa5.43□□□□□ -1.54
NFKB1-208ENST00000509165 MLST8Q9BVC4 326 aa5.43□□□□□ -1.54
NFKB1-208ENST00000509165 SERPINB13Q9UIV8 391 aa5.43□□□□□ -1.54
NFKB1-208ENST00000509165 LIMCH1Q9UPQ0 1083 aa5.43□□□□□ -1.54
NFKB1-208ENST00000509165 TET3O43151 1660 aa5.43□□□□□ -1.54
NFKB1-208ENST00000509165 GPATCH8Q9UKJ3 1502 aaKnown RBP5.43□□□□□ -1.54
NFKB1-208ENST00000509165 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.43□□□□□ -1.54
NFKB1-208ENST00000509165 XPOTO43592 962 aaKnown RBP5.42□□□□□ -1.54
NFKB1-208ENST00000509165 NCR1O76036 304 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 ZRANB2O95218 330 aaKnown RBP eCLIP5.42□□□□□ -1.54
NFKB1-208ENST00000509165 DDCP20711 480 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 RAP2BP61225 183 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 TARDBPQ13148 414 aaKnown RBP eCLIP5.42□□□□□ -1.54
NFKB1-208ENST00000509165 UBXN2BQ14CS0 331 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 PTPN21Q16825 1174 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 BEAN1Q3B7T3 259 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 C3orf36Q3SXR2 165 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 PCSK4Q6UW60 755 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 DCBLD1Q8N8Z6 715 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 MANSC1Q9H8J5 431 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 AKIP1Q9NQ31 210 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 HOMER2Q9NSB8 354 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 FBXO34Q9NWN3 711 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 NOP58Q9Y2X3 529 aaKnown RBP5.42□□□□□ -1.54
NFKB1-208ENST00000509165 SPEF1Q9Y4P9 236 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 NKTRP30414 1462 aaKnown RBP5.42□□□□□ -1.54
NFKB1-208ENST00000509165 ABCC3O15438 1527 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 MYBBP1AQ9BQG0 1328 aaKnown RBP5.42□□□□□ -1.54
NFKB1-208ENST00000509165 PNPLA6Q8IY17 1366 aa5.42□□□□□ -1.54
NFKB1-208ENST00000509165 SETD5Q9C0A6 1442 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 ERVK-7P63135 1459 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 CENPVL1A0A0U1RR11 272 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 RNASET2O00584 256 aaKnown RBP5.41□□□□□ -1.54
NFKB1-208ENST00000509165 TEX33O43247 280 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 LPXNO60711 386 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 PRSS23O95084 383 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 ELANEP08246 267 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 TGM1P22735 817 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 SLC16A1P53985 500 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 DPTQ07507 201 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 MED25Q71SY5 747 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 BRINP3Q76B58 766 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 PLXDC1Q8IUK5 500 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 RHOT2Q8IXI1 618 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 RHOT1Q8IXI2 618 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 DDX17Q92841 729 aaKnown RBP5.41□□□□□ -1.54
NFKB1-208ENST00000509165 FAM193BQ96PV7 902 aaPredicted RBP5.41□□□□□ -1.54
NFKB1-208ENST00000509165 DMRTA2Q96SC8 542 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 KLHL11Q9NVR0 708 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 USP15Q9Y4E8 981 aaPredicted RBP5.41□□□□□ -1.54
NFKB1-208ENST00000509165 PCDHA13Q9Y5I0 950 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 MRFAP1Q9Y605 127 aa5.41□□□□□ -1.54
NFKB1-208ENST00000509165 CHD2O14647 1828 aaKnown RBP5.4□□□□□ -1.54
NFKB1-208ENST00000509165 CCDC154A6NI56 674 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 SGTAO43765 313 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 POMCP01189 267 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 LAG3P18627 525 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 GCSHP23434 173 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 SLC6A2P23975 617 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 BMPR1AP36894 532 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 ADKP55263 362 aaKnown RBP5.4□□□□□ -1.54
NFKB1-208ENST00000509165 CTXN1P60606 82 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 IL10RAQ13651 578 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 DACT2Q5SW24 774 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 ZNF529Q6P280 563 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 OR56A1Q8NGH5 318 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 IFI44Q8TCB0 444 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 RAB24Q969Q5 203 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 HDAC10Q969S8 669 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 SMAD5Q99717 465 aaKnown RBP5.4□□□□□ -1.54
NFKB1-208ENST00000509165 ADAM2Q99965 735 aa5.4□□□□□ -1.54
NFKB1-208ENST00000509165 SAP30BPQ9UHR5 308 aaKnown RBP5.4□□□□□ -1.54
NFKB1-208ENST00000509165 TRPC5Q9UL62 973 aaPredicted RBP5.4□□□□□ -1.54
NFKB1-208ENST00000509165 RUVBL1Q9Y265 456 aaKnown RBP5.4□□□□□ -1.54
NFKB1-208ENST00000509165 ARHGEF5Q12774 1597 aa5.4□□□□□ -1.55
NFKB1-208ENST00000509165 CHD4Q14839 1912 aa5.4□□□□□ -1.55
NFKB1-208ENST00000509165 COL4A3Q01955 1670 aa5.4□□□□□ -1.55
NFKB1-208ENST00000509165 KIAA1107Q9UPP5 1409 aa5.4□□□□□ -1.55
NFKB1-208ENST00000509165 MBD5Q9P267 1494 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 GLI3P10071 1580 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 CCDC78A2IDD5 438 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 KIF3BO15066 747 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 PPFIA4O75335 1185 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 ABHD16AO95870 558 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 CFIP05156 583 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 SLC6A4P31645 630 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 CDC42EP1Q00587 391 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 KIF23Q02241 960 aaPredicted RBP5.39□□□□□ -1.55
NFKB1-208ENST00000509165 TIGD2Q4W5G0 525 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 LY6G5CQ5SRR4 150 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 UBE3BQ7Z3V4 1068 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 PNMA8AQ86V59 439 aaPredicted RBP5.39□□□□□ -1.55
NFKB1-208ENST00000509165 ARHGEF19Q8IW93 802 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 SYNE4Q8N205 404 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms