RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SOD2P04179 222 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 RPN1P04843 607 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 CNPP09543 421 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 KCNA5P22460 613 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 TKTP29401 623 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 AARSP49588 968 aaKnown RBP eCLIP7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 SMTNP53814 917 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 DSG1Q02413 1049 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 RNASELQ05823 741 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 ADAM15Q13444 863 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 C1orf220Q5T0J3 134 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 LMBRD2Q68DH5 695 aaPredicted RBP7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 SYCE2Q6PIF2 218 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 EFHBQ8N7U6 833 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 OR5B17Q8NGF7 314 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 SPATA20Q8TB22 786 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 RSPH1Q8WYR4 309 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 BICD1Q96G01 975 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 TMEM169Q96HH4 297 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 FBXL18Q96ME1 805 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 ACAP3Q96P50 834 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 KLHL5Q96PQ7 755 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 RPS6KC1Q96S38 1066 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 ADPGKQ9BRR6 497 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 MSTO1Q9BUK6 570 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 CCDC94Q9BW85 323 aaPredicted RBP7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 PCIF1Q9H4Z3 704 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 RXFP1Q9HBX9 757 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 UBN1Q9NPG3 1134 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 ENTPD7Q9NQZ7 604 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 CHMP5Q9NZZ3 219 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 SIX4Q9UIU6 781 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 AGO2Q9UKV8 859 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 NME7Q9Y5B8 376 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 HCFC2Q9Y5Z7 792 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 NOTCH4Q99466 2003 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 PVALEFA0A1B0GWK0 134 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 C2CD2LO14523 706 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 CLIC2O15247 247 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 CLDN3O15551 220 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 HCRTO43612 131 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 TBC1D4O60343 1298 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 RHOBTB3O94955 611 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 THP07101 528 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 CLTAP09496 248 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 BMP1P13497 986 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 FGFR3P22607 806 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 LRPAP1P30533 357 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 CASP4P49662 377 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 CLCN4P51793 760 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 PMS1P54277 932 aaKnown RBP7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 FAM160A1Q05DH4 1040 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 POSTNQ15063 836 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 PTPROQ16827 1216 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 LEXMQ3ZCV2 418 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 PHLDB3Q6NSJ2 640 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 LLGL2Q6P1M3 1020 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 C12orf56Q8IXR9 622 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 CCDC65Q8IXS2 484 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 MRPL43Q8N983 215 aaKnown RBP7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 C1orf127Q8N9H9 656 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 ELMO3Q96BJ8 720 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 BORCS6Q96GS4 357 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 ACCSQ96QU6 501 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 RTP3Q9BQQ7 232 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 FAM213AQ9BRX8 229 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 COL25A1Q9BXS0 654 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 AAASQ9NRG9 546 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 CLDND1Q9NY35 253 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 HSPBP1Q9NZL4 362 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 ADAM28Q9UKQ2 775 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 FAN1Q9Y2M0 1017 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 IRAK3Q9Y616 596 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 COL4A3Q01955 1670 aa7.83□□□□□ -1.16
TOPBP1-207ENST00000509162 ANO9A1A5B4 782 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 H0YCG3 227 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 MBTPS2O43462 519 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 PAPLNO95428 1278 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 WEE2P0C1S8 567 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 GARTP22102 1010 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 ANP32AP39687 249 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 ALDH7A1P49419 539 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 GLUD2P49448 558 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 ALCAMQ13740 583 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 SMC1AQ14683 1233 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 TMEM164Q5U3C3 297 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 SPATA1Q5VX52 437 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 CLEC17AQ6ZS10 378 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 HACE1Q8IYU2 909 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 CEP57L1Q8IYX8 460 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 PHTF2Q8N3S3 785 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 C12orf76Q8N812 135 aaPredicted RBP7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 SMRP1Q8NCR6 262 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 LNX1Q8TBB1 728 aaPredicted RBP7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 PIK3R5Q8WYR1 880 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 POMGNT1Q8WZA1 660 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 SUSD6Q92537 303 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 ZNF707Q96C28 371 aaPredicted RBP7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 ASB2Q96Q27 587 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms