RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 SHC3Q92529 594 aa11.69□□□□□ -0.54
POLR2J3-214ENST00000508910 DPF3Q92784 378 aa11.69□□□□□ -0.54
POLR2J3-214ENST00000508910 ELMO3Q96BJ8 720 aa11.69□□□□□ -0.54
POLR2J3-214ENST00000508910 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-214ENST00000508910 KREMEN1Q96MU8 473 aa11.69□□□□□ -0.54
POLR2J3-214ENST00000508910 CASD1Q96PB1 797 aa11.69□□□□□ -0.54
POLR2J3-214ENST00000508910 LBHD1Q9BQE6 289 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-214ENST00000508910 FAM124BQ9H5Z6 455 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-214ENST00000508910 TBC1D13Q9NVG8 400 aa11.69□□□□□ -0.54
POLR2J3-214ENST00000508910 ZNHIT6Q9NWK9 470 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-214ENST00000508910 ZMYND8Q9ULU4 1186 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-214ENST00000508910 FNDC1Q4ZHG4 1894 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 TBKBP1A7MCY6 615 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 FGBP02675 491 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 CCDC172P0C7W6 258 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 FERP16591 822 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 SYN1P17600 705 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 FECHP22830 423 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 PAX3P23760 479 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 SOX5P35711 763 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 ASPAP45381 313 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 DEFB103AP81534 67 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 ASIC2Q16515 512 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 MEA1Q16626 185 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 SCARA5Q6ZMJ2 495 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 C16orf59Q7L2K0 433 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 LRRC8AQ8IWT6 810 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 TTC39CQ8N584 583 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 KAT5Q92993 513 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 TOP1MTQ969P6 601 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 TRIM44Q96DX7 344 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 FAM193BQ96PV7 902 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 ARID3AQ99856 593 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 BCO2Q9BYV7 579 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 GPR88Q9GZN0 384 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 CYP3A43Q9HB55 503 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 AIPL1Q9NZN9 384 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 NXF1Q9UBU9 619 aaKnown RBP11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 NR2E3Q9Y5X4 410 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 SCN1AP35498 2009 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 COL4A6Q14031 1691 aa11.68□□□□□ -0.54
POLR2J3-214ENST00000508910 ZBBXA8MT70 800 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 KPNA7A9QM74 516 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 DGKIO75912 1065 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 UPP2O95045 317 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 GATMP50440 423 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 CLCNKBP51801 687 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 LILRA4P59901 499 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 CDK17Q00537 523 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 UPP1Q16831 310 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 HS1BP3Q53T59 392 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 TMEM240Q5SV17 173 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 E4F1Q66K89 784 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 ZNF365Q70YC5 407 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 OTOP2Q7RTS6 562 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 COLGALT2Q8IYK4 626 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 UBR7Q8N806 425 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 BAG1Q99933 345 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 MTIF3Q9H2K0 278 aaKnown RBP11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 SMYD3Q9H7B4 428 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 GDAP2Q9NXN4 497 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 PCDH10Q9P2E7 1040 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 POLIQ9UNA4 740 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 SNX9Q9Y5X1 595 aa11.67□□□□□ -0.54
POLR2J3-214ENST00000508910 TMEM189-UBE2V1I3L0A0 370 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 FOXN3O00409 490 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 B4GALT3O60512 393 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 GFPT2O94808 682 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 DDHD2O94830 711 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 SERPING1P05155 500 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 PNMA6AP0CW24 399 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 KRT5P13647 590 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 ACO1P21399 889 aaKnown RBP11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 USP8P40818 1118 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 PRKCIP41743 596 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 AARSP49588 968 aaKnown RBP eCLIP11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 EPHB4P54760 987 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 CCZ1BP86790 482 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 CCZ1P86791 482 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 CYP26C1Q6V0L0 522 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 ZNF280BQ86YH2 543 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 TMTC1Q8IUR5 882 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 TMEM139Q8IV31 216 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 FAM71AQ8IYT1 594 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 TOP6BLQ8N6T0 577 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 C3orf58Q8NDZ4 430 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 HERVK_113Q902F9 699 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 MMS19Q96T76 1030 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 TMEM175Q9BSA9 504 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 KCNF1Q9H3M0 494 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 RC3H2Q9HBD1 1191 aaKnown RBP11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 CISHQ9NSE2 258 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 CACNG4Q9UBN1 327 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 CNTN6Q9UQ52 1028 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 PCDHB4Q9Y5E5 795 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 BZW2Q9Y6E2 419 aaKnown RBP11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 PTPRSQ13332 1948 aa11.66□□□□□ -0.54
POLR2J3-214ENST00000508910 ARHGEF37A1IGU5 675 aa11.65□□□□□ -0.54
POLR2J3-214ENST00000508910 SPTLC1O15269 473 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms