RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 NOL6Q9H6R4 1146 aaKnown RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 ZFYVE28Q9HCC9 887 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 AFF4Q9UHB7 1163 aaKnown RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 CORO1CQ9ULV4 474 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 PCDHGB5Q9Y5G0 923 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 PCDHA8Q9Y5H6 950 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 PRAMEF25A6NGN4 478 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 H7C1W4 665 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 TPP1O14773 563 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 IFIT3O14879 490 aaKnown RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 RHCEP18577 417 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 MX1P20591 662 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 RGS3P49796 1198 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 RHDQ02161 417 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 PDCLQ13371 301 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 RC3H1Q5TC82 1133 aaKnown RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 BLOC1S3Q6QNY0 202 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 DENND6AQ8IWF6 608 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 SULF2Q8IWU5 870 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 CPA6Q8N4T0 437 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 PCYOX1LQ8NBM8 494 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 MOSPD2Q8NHP6 518 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 RHOVQ96L33 236 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 AK8Q96MA6 479 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 ISCA1Q9BUE6 129 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 RHOBTB2Q9BYZ6 727 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 NOD2Q9HC29 1040 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 SLC39A10Q9ULF5 831 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 AP4E1Q9UPM8 1137 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 MAP3K15Q6ZN16 1313 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 PI4KAP2A4QPH2 592 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 BEST1O76090 585 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 CD3EP07766 207 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 GNAT1P11488 350 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 TMEM11P17152 192 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 ACAT1P24752 427 aaKnown RBP4.15□□□□□ -1.74
NEDD4-209ENST00000508871 EEF1GP26641 437 aaKnown RBP4.15□□□□□ -1.74
NEDD4-209ENST00000508871 MAPK4P31152 587 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 MAP2K2P36507 400 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 GRIK1P39086 918 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 CASP7P55210 303 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 IL1RL1Q01638 556 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 USP39Q53GS9 565 aaKnown RBP4.15□□□□□ -1.74
NEDD4-209ENST00000508871 PI4KAP1Q8N8J0 262 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 ETNPPLQ8TBG4 499 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 CACTINQ8WUQ7 758 aaKnown RBP4.15□□□□□ -1.74
NEDD4-209ENST00000508871 FAM129BQ96TA1 746 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 TRIM54Q9BYV2 358 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 PCDHGA8Q9Y5G5 932 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 TNKSO95271 1327 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 H0YAE9 185 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 GABRDO14764 452 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 ZNF862O60290 1169 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 DNAJC8O75937 253 aaPredicted RBP4.15□□□□□ -1.74
NEDD4-209ENST00000508871 PRKD3O94806 890 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 CLEC2LP0C7M8 214 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 PSMA5P28066 241 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 PTGS2P35354 604 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 ADD1P35611 737 aaKnown RBP4.15□□□□□ -1.74
NEDD4-209ENST00000508871 IL6STP40189 918 aaPredicted RBP4.15□□□□□ -1.74
NEDD4-209ENST00000508871 DPP6P42658 865 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 SLC5A3P53794 718 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 EIF5P55010 431 aaKnown RBP4.15□□□□□ -1.74
NEDD4-209ENST00000508871 SPAG1Q07617 926 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 MPP2Q14168 576 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 CRYMQ14894 314 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 DOK7Q18PE1 504 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 SPATA1Q5VX52 437 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 NLRP9Q7RTR0 991 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 RD3Q7Z3Z2 195 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 SESTD1Q86VW0 696 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 LSRQ86X29 649 aaPredicted RBP4.15□□□□□ -1.74
NEDD4-209ENST00000508871 ETFBKMTQ8IXQ9 262 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 TTC39CQ8N584 583 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 MAELQ96JY0 434 aaKnown RBP4.15□□□□□ -1.74
NEDD4-209ENST00000508871 COQ7Q99807 217 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 KIFC3Q9BVG8 833 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 LMAN2LQ9H0V9 348 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 RPAP3Q9H6T3 665 aaPredicted RBP4.15□□□□□ -1.74
NEDD4-209ENST00000508871 TMPRSS4Q9NRS4 437 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 GULP1Q9UBP9 304 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 EXOC7Q9UPT5 735 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 PALLDQ8WX93 1383 aa4.15□□□□□ -1.74
NEDD4-209ENST00000508871 WDR64B1ANS9 1081 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 FAM227AF5H4B4 570 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 AXIN1O15169 862 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 SMNDC1O75940 238 aaKnown RBP eCLIP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 GAS8O95995 478 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 ABCB1P08183 1280 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 MYZAPP0CAP1 466 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 RPL17P18621 184 aaKnown RBP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 GTF2A2P52657 109 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 PDE1AP54750 535 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 CLCQ05315 142 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 BNIP1Q12981 228 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 NNTQ13423 1086 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 VWA3BQ502W6 1294 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 TDRD12Q587J7 1177 aaKnown RBP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 HECTD3Q5T447 861 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 SH3PXD2AQ5TCZ1 1133 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms