RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 NXNQ6DKJ4 435 aa9.03□□□□□ -0.96
CHD1-205ENST00000508756 FOXR2Q6PJQ5 311 aa9.03□□□□□ -0.96
CHD1-205ENST00000508756 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.03□□□□□ -0.96
CHD1-205ENST00000508756 SLC17A8Q8NDX2 589 aa9.03□□□□□ -0.96
CHD1-205ENST00000508756 KLHDC4Q8TBB5 520 aa9.03□□□□□ -0.96
CHD1-205ENST00000508756 TNPO1Q92973 898 aaKnown RBP9.03□□□□□ -0.96
CHD1-205ENST00000508756 SLC35A4Q96G79 324 aa9.03□□□□□ -0.96
CHD1-205ENST00000508756 CDK5RAP3Q96JB5 506 aa9.03□□□□□ -0.96
CHD1-205ENST00000508756 ALOXE3Q9BYJ1 711 aa9.03□□□□□ -0.96
CHD1-205ENST00000508756 KRTAP4-11Q9BYQ6 195 aa9.03□□□□□ -0.96
CHD1-205ENST00000508756 MRPL46Q9H2W6 279 aaKnown RBP9.03□□□□□ -0.96
CHD1-205ENST00000508756 ARMT1Q9H993 441 aa9.03□□□□□ -0.96
CHD1-205ENST00000508756 GNL3LQ9NVN8 582 aaKnown RBP9.03□□□□□ -0.96
CHD1-205ENST00000508756 KCNE5Q9UJ90 142 aa9.03□□□□□ -0.96
CHD1-205ENST00000508756 ING1Q9UK53 422 aaPredicted RBP9.03□□□□□ -0.96
CHD1-205ENST00000508756 MTO1Q9Y2Z2 717 aaKnown RBP9.03□□□□□ -0.96
CHD1-205ENST00000508756 PPFIA4O75335 1185 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 ZFPL1O95159 310 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 SPDEFO95238 335 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 MATN4O95460 622 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 AHSGP02765 367 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 TP53BP2Q13625 1128 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 MLC1Q15049 377 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 LY6G5CQ5SRR4 150 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 USP51Q70EK9 711 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 ZNF627Q7L945 461 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 AOPEPQ8N6M6 819 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 PDPRQ8NCN5 879 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 RUNDC1Q96C34 613 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 FAM167AQ96KS9 214 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 LRFN3Q9BTN0 628 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 METTL14Q9HCE5 456 aaKnown RBP9.02□□□□□ -0.97
CHD1-205ENST00000508756 RNF181Q9P0P0 153 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 GABBR1Q9UBS5 961 aa9.02□□□□□ -0.97
CHD1-205ENST00000508756 ZNF785A8K8V0 405 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 E9PLN8 166 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 ERN1O75460 977 aaKnown RBP9.01□□□□□ -0.97
CHD1-205ENST00000508756 CDKL5O76039 1030 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 UBXN7O94888 489 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 HTR1BP28222 390 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 GUCY1B3Q02153 619 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 SPDYE7PQ495Y7 208 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 ARHGEF19Q8IW93 802 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 MYO1HQ8N1T3 1032 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 CELF5Q8N6W0 485 aaKnown RBP9.01□□□□□ -0.97
CHD1-205ENST00000508756 NSUN7Q8NE18 718 aaKnown RBP9.01□□□□□ -0.97
CHD1-205ENST00000508756 NACC2Q96BF6 587 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 VKORC1Q9BQB6 163 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 TMPRSS5Q9H3S3 457 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 CFAP97Q9P2B7 532 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 NOX1Q9Y5S8 564 aa9.01□□□□□ -0.97
CHD1-205ENST00000508756 B3GALT2O43825 422 aa9□□□□□ -0.97
CHD1-205ENST00000508756 U2AF1L5P0DN76 240 aaPredicted RBP9□□□□□ -0.97
CHD1-205ENST00000508756 IL12RB1P42701 662 aa9□□□□□ -0.97
CHD1-205ENST00000508756 MXRA7P84157 204 aa9□□□□□ -0.97
CHD1-205ENST00000508756 U2AF1Q01081 240 aaKnown RBP eCLIP9□□□□□ -0.97
CHD1-205ENST00000508756 PDSS2Q86YH6 399 aa9□□□□□ -0.97
CHD1-205ENST00000508756 VRK3Q8IV63 474 aa9□□□□□ -0.97
CHD1-205ENST00000508756 WDR11Q9BZH6 1224 aa9□□□□□ -0.97
CHD1-205ENST00000508756 STAP2Q9UGK3 403 aa9□□□□□ -0.97
CHD1-205ENST00000508756 AKAP8O43823 692 aaKnown RBP8.99□□□□□ -0.97
CHD1-205ENST00000508756 CTNND1O60716 968 aaKnown RBP8.99□□□□□ -0.97
CHD1-205ENST00000508756 ANXA1P04083 346 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 ZNF135P52742 658 aaPredicted RBP8.99□□□□□ -0.97
CHD1-205ENST00000508756 KIF22Q14807 665 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 PTPAQ15257 358 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 CYP2A13Q16696 494 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 GEN1Q17RS7 908 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 MINDY4Q4G0A6 757 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 Q6ZPA2 131 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 OVCH2Q7RTZ1 564 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 FMNL3Q8IVF7 1028 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 CFAP52Q8N1V2 620 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 Q8NA96 180 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 ASB10Q8WXI3 467 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 SCAMP4Q969E2 229 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 MED15Q96RN5 788 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 SERHL2Q9H4I8 314 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 RLIMQ9NVW2 624 aa8.99□□□□□ -0.97
CHD1-205ENST00000508756 SLPIP03973 132 aa8.98□□□□□ -0.97
CHD1-205ENST00000508756 RARBP10826 455 aa8.98□□□□□ -0.97
CHD1-205ENST00000508756 RAB1AP62820 205 aa8.98□□□□□ -0.97
CHD1-205ENST00000508756 EXOSC9Q06265 439 aaKnown RBP8.98□□□□□ -0.97
CHD1-205ENST00000508756 ZNF844Q08AG5 666 aa8.98□□□□□ -0.97
CHD1-205ENST00000508756 WDR75Q8IWA0 830 aaKnown RBP8.98□□□□□ -0.97
CHD1-205ENST00000508756 BRIX1Q8TDN6 353 aaKnown RBP8.98□□□□□ -0.97
CHD1-205ENST00000508756 MTFMTQ96DP5 389 aaKnown RBP8.98□□□□□ -0.97
CHD1-205ENST00000508756 PCED1AQ9H1Q7 454 aa8.98□□□□□ -0.97
CHD1-205ENST00000508756 GALNT9Q9HCQ5 603 aa8.98□□□□□ -0.97
CHD1-205ENST00000508756 MRPS18AQ9NVS2 196 aaKnown RBP8.98□□□□□ -0.97
CHD1-205ENST00000508756 ZDHHC8Q9ULC8 765 aa8.98□□□□□ -0.97
CHD1-205ENST00000508756 PCDHA6Q9UN73 950 aa8.98□□□□□ -0.97
CHD1-205ENST00000508756 AGAP1Q9UPQ3 857 aa8.98□□□□□ -0.97
CHD1-205ENST00000508756 FOSP01100 380 aaPredicted RBP8.97□□□□□ -0.97
CHD1-205ENST00000508756 SCAPQ12770 1279 aa8.97□□□□□ -0.97
CHD1-205ENST00000508756 FHL2Q14192 279 aa8.97□□□□□ -0.97
CHD1-205ENST00000508756 CRB2Q5IJ48 1285 aa8.97□□□□□ -0.97
CHD1-205ENST00000508756 ARMC6Q6NXE6 501 aa8.97□□□□□ -0.97
CHD1-205ENST00000508756 C14orf80Q86SX3 495 aa8.97□□□□□ -0.97
CHD1-205ENST00000508756 DAAM2Q86T65 1068 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms