RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ATICP31939 592 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 GTF2H1P32780 548 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 IRS1P35568 1242 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 NRIP1P48552 1158 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 NLRP12P59046 1061 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 LILRA4P59901 499 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 YWHAHQ04917 246 aaPredicted RBP9.85□□□□□ -0.83
NUP54-207ENST00000508583 CETN1Q12798 172 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 BFSP1Q12934 665 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 BIRC3Q13489 604 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 PSMD5Q16401 504 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 DUSP6Q16828 381 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 TPD52L1Q16890 204 aaPredicted RBP9.85□□□□□ -0.83
NUP54-207ENST00000508583 KLHL40Q2TBA0 621 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 PUS10Q3MIT2 529 aaKnown RBP9.85□□□□□ -0.83
NUP54-207ENST00000508583 KIAA0319Q5VV43 1072 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 ANKRD40Q6AI12 368 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 ZNF280DQ6N043 979 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 RTL10Q7L3V2 364 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 C1orf127Q8N9H9 656 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 C3orf58Q8NDZ4 430 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 ZSWIM2Q8NEG5 633 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 RABGGTAQ92696 567 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 VN1R3Q9BXE9 311 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 DNAI2Q9GZS0 605 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 RXFP1Q9HBX9 757 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 DZANK1Q9NVP4 752 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 ANO10Q9NW15 660 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 CACNG4Q9UBN1 327 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 ARMCX3Q9UH62 379 aaPredicted RBP9.85□□□□□ -0.83
NUP54-207ENST00000508583 AGAP1Q9UPQ3 857 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 BACE2Q9Y5Z0 518 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 HIDE1A8MVS5 230 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 KPNA7A9QM74 516 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 PPP1R3GB7ZBB8 358 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 F8W810 466 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 HUS1O60921 280 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 N4BP1O75113 896 aaKnown RBP9.84□□□□□ -0.83
NUP54-207ENST00000508583 CLSTN1O94985 981 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 GLUD1P00367 558 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 CNPP09543 421 aaKnown RBP9.84□□□□□ -0.83
NUP54-207ENST00000508583 CCDC192P0DO97 292 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 TRIM21P19474 475 aaKnown RBP9.84□□□□□ -0.83
NUP54-207ENST00000508583 BMP6P22004 513 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 HYAL1Q12794 435 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 COL19A1Q14993 1142 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 CCDC40Q4G0X9 1142 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 VARS2Q5ST30 1063 aaKnown RBP9.84□□□□□ -0.83
NUP54-207ENST00000508583 LCE2DQ5TA82 110 aaPredicted RBP9.84□□□□□ -0.83
NUP54-207ENST00000508583 TTI2Q6NXR4 508 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 TMEM184AQ6ZMB5 413 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 RBM43Q6ZSC3 357 aaKnown RBP9.84□□□□□ -0.83
NUP54-207ENST00000508583 TRAPPC11Q7Z392 1133 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 FRMD5Q7Z6J6 570 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 FILIP1Q7Z7B0 1213 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 RBM23Q86U06 439 aaKnown RBP9.84□□□□□ -0.83
NUP54-207ENST00000508583 FAM114A1Q8IWE2 563 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 ZC3H3Q8IXZ2 948 aaKnown RBP9.84□□□□□ -0.83
NUP54-207ENST00000508583 THEM5Q8N1Q8 247 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 TMEM86AQ8N2M4 240 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 HDAC7Q8WUI4 952 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 TAF4BQ92750 862 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 HPDLQ96IR7 371 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 SENP8Q96LD8 212 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 DCBLD2Q96PD2 775 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 NAT10Q9H0A0 1025 aaKnown RBP9.84□□□□□ -0.83
NUP54-207ENST00000508583 IGFLR1Q9H665 355 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 CLDND1Q9NY35 253 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 THEGQ9P2T0 379 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 MTRRQ9UBK8 725 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 MAFFQ9ULX9 164 aa9.84□□□□□ -0.83
NUP54-207ENST00000508583 XIRP2A4UGR9 3374 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 PRUNE2Q8WUY3 3088 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 OR6C75A6NL08 312 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 LRRIQ3A6PVS8 624 aaPredicted RBP9.83□□□□□ -0.84
NUP54-207ENST00000508583 CYB561D2O14569 222 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 TEX28O15482 410 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 LILRB3O75022 631 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 OAZ2O95190 189 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 STAU1O95793 577 aaKnown RBP9.83□□□□□ -0.84
NUP54-207ENST00000508583 CYP11A1P05108 521 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 FAM163BP0C2L3 166 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 TKTP29401 623 aaKnown RBP9.83□□□□□ -0.84
NUP54-207ENST00000508583 PIK3CAP42336 1068 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 BRCC3P46736 316 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 CASP4P49662 377 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 GUCY2FP51841 1108 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 TNNC1P63316 161 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 SMARCB1Q12824 385 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 STX1AQ16623 288 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 CTC1Q2NKJ3 1217 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 CTXN3Q4LDR2 81 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 RTP2Q5QGT7 225 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 TCERG1LQ5VWI1 586 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 OVOS1Q6IE37 1185 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 EP400NLQ6ZTU2 488 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 DPH6Q7L8W6 267 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 TOP6BLQ8N6T0 577 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 OR5B17Q8NGF7 314 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 LNX1Q8TBB1 728 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms