RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 RASSF3Q86WH2 238 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 SMC5Q8IY18 1101 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 SECISBP2LQ93073 1101 aaKnown RBP5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 CAVIN3Q969G5 261 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 EAF2Q96CJ1 260 aaPredicted RBP5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 ZNF764Q96H86 408 aaPredicted RBP5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 BBC3Q96PG8 261 aaPredicted RBP5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 ADAM2Q99965 735 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 POLR3GLQ9BT43 218 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 RBM28Q9NW13 759 aaKnown RBP5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 SYBUQ9NX95 663 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 PLEKHH1Q9ULM0 1364 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 CASKIN1Q8WXD9 1431 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 NKTRP30414 1462 aaKnown RBP5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 BCL9LQ86UU0 1499 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 TET3O43151 1660 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 CEP350Q5VT06 3117 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 ABCC3O15438 1527 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 MBD5Q9P267 1494 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 RTEL1-TNFRSF6BF6WH68 1400 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 NPC1L1Q9UHC9 1359 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 RAD50Q92878 1312 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 KIF1CO43896 1103 aaKnown RBP5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 MBD3O95983 291 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 TSPY4P0CV99 314 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 TSPY10P0CW01 314 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 DDX6P26196 483 aaKnown RBP eCLIP5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 AVPR1BP47901 424 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 CLK3P49761 638 aaKnown RBP5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 NUCB2P80303 420 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 MRPS21P82921 87 aaKnown RBP5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 UGT8Q16880 541 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 FAM102AQ5T9C2 384 aaPredicted RBP5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 METRNLQ641Q3 311 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 KRT27Q7Z3Y8 459 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 RPAINQ86UA6 219 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 ADGRG3Q86Y34 549 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 REPS2Q8NFH8 660 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 ZNF480Q8WV37 535 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 PHACTR3Q96KR7 559 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 ZNF830Q96NB3 372 aaPredicted RBP5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 MYCBPQ99417 103 aaPredicted RBP5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 NEU1Q99519 415 aa5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 CWC15Q9P013 229 aaKnown RBP5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 EPN1Q9Y6I3 576 aaPredicted RBP5.35□□□□□ -1.55
PDLIM5-211ENST00000508531 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 E9PCH4 1651 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 NHSL1Q5SYE7 1610 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 UTRNP46939 3433 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 USP19O94966 1318 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 A0A087X0B3 334 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 PIPSLA2A3N6 862 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 MASP2O00187 686 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 TULP2O00295 520 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 HTATSF1O43719 755 aaKnown RBP5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 PDE8AO60658 829 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 GASTP01350 101 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 CRHR1P34998 444 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 IL12RB1P42701 662 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 ID4P47928 161 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 KCNJ4P48050 445 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 CHN2P52757 468 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 RESTQ13127 1097 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 HDGFL2Q7Z4V5 671 aaPredicted RBP5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 ZFP28Q8NHY6 868 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 SLC35B2Q8TB61 432 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 NTN5Q8WTR8 489 aaPredicted RBP5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 ASB10Q8WXI3 467 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 PIBF1Q8WXW3 757 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 LINC00476Q8WZB0 136 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 USP7Q93009 1102 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 ORAI2Q96SN7 254 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 TOPORSQ9NS56 1045 aaPredicted RBP5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 DPP7Q9UHL4 492 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 TBX22Q9Y458 520 aa5.34□□□□□ -1.55
PDLIM5-211ENST00000508531 ASXL1Q8IXJ9 1541 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 EHBP1L1Q8N3D4 1523 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 PARD3Q8TEW0 1356 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 RPTORQ8N122 1335 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 CLSTN1O94985 981 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 SPDEFO95238 335 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 HLA-DOAP06340 250 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 HKR1P10072 659 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 MYCLP1P12525 358 aaPredicted RBP5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 BPIP17213 487 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 ADSLP30566 484 aaPredicted RBP5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 PTPN7P35236 360 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 PLA2G5P39877 138 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 FLT3LGP49771 235 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 SEC24CP53992 1094 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 CCT2P78371 535 aaKnown RBP5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 CBX1P83916 185 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 CDK17Q00537 523 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 FOXI1Q12951 378 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 GPS2Q13227 327 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 TEX35Q5T0J7 233 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 KIAA0907Q7Z7F0 614 aaPredicted RBP5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 UNC5CLQ8IV45 518 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 FBXO18Q8NFZ0 1043 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms