RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 INHBCP55103 352 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 HAND2P61296 217 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 TFAP4Q01664 338 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 ICA1Q05084 483 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 MCMDC2Q4G0Z9 681 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 PAN2Q504Q3 1202 aaKnown RBP5.36□□□□□ -1.55
NUP54-206ENST00000508465 WDR78Q5VTH9 848 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 GIMAP6Q6P9H5 292 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 CWC27Q6UX04 472 aaKnown RBP5.36□□□□□ -1.55
NUP54-206ENST00000508465 TMEM179Q6ZVK1 233 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 POLNQ7Z5Q5 900 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 ZNF589Q86UQ0 364 aaPredicted RBP5.36□□□□□ -1.55
NUP54-206ENST00000508465 CCAR1Q8IX12 1150 aaKnown RBP5.36□□□□□ -1.55
NUP54-206ENST00000508465 ZNF444Q8N0Y2 327 aaPredicted RBP5.36□□□□□ -1.55
NUP54-206ENST00000508465 GPRC5AQ8NFJ5 357 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 ARMC5Q96C12 935 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 CCDC17Q96LX7 622 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 NACAP1Q9BZK3 213 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 TANGO6Q9C0B7 1094 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 NAPBQ9H115 298 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 PORCNQ9H237 461 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 HELLSQ9NRZ9 838 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 KCND1Q9NSA2 647 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 FBXO28Q9NVF7 368 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 BTBD7Q9P203 1132 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 GJD2Q9UKL4 321 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 MYPNQ86TC9 1320 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 ZSWIM8A7E2V4 1837 aa5.36□□□□□ -1.55
NUP54-206ENST00000508465 BAZ2AQ9UIF9 1905 aaKnown RBP5.36□□□□□ -1.55
NUP54-206ENST00000508465 DOCK1Q14185 1865 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 MAST2Q6P0Q8 1798 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 A0A087X1B8 175 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 RANBP6O60518 1105 aaKnown RBP5.35□□□□□ -1.55
NUP54-206ENST00000508465 NMT2O60551 498 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 CUTAO60888 179 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 HSPD1P10809 573 aaKnown RBP5.35□□□□□ -1.55
NUP54-206ENST00000508465 CCL5P13501 91 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 CR2P20023 1033 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 CYP2B6P20813 491 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 USP14P54578 494 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 SNAP25P60880 206 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 PFKPQ01813 784 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 PPARAQ07869 468 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 SPIRE1Q08AE8 756 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 TUSC3Q13454 348 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 PLS1Q14651 629 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 COG2Q14746 738 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 FAM110CQ1W6H9 321 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 ZMAT1Q5H9K5 638 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 RRP12Q5JTH9 1297 aaKnown RBP5.35□□□□□ -1.55
NUP54-206ENST00000508465 FAM83BQ5T0W9 1011 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 IGFL4Q6B9Z1 124 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 DENND5AQ6IQ26 1287 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 C6orf15Q6UXA7 325 aaPredicted RBP5.35□□□□□ -1.55
NUP54-206ENST00000508465 FAM178BQ8IXR5 827 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 NEU4Q8WWR8 484 aaPredicted RBP5.35□□□□□ -1.55
NUP54-206ENST00000508465 COA7Q96BR5 231 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 ZNF333Q96JL9 665 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 C12orf42Q96LP6 360 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 PLEKHG4BQ96PX9 1271 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 KANSL2Q9H9L4 492 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 GPR27Q9NS67 375 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 HOXC10Q9NYD6 342 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 ARPP21Q9UBL0 812 aaPredicted RBP5.35□□□□□ -1.55
NUP54-206ENST00000508465 TMX2Q9Y320 296 aa5.35□□□□□ -1.55
NUP54-206ENST00000508465 FOCADQ5VW36 1801 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 F5H6K3 240 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 AGRPO00253 132 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 SUSD5O60279 629 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 FLOT1O75955 427 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 NDUFB10O96000 172 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 SLC3A2P08195 630 aaKnown RBP5.34□□□□□ -1.55
NUP54-206ENST00000508465 TSPY3P0CV98 308 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 TSPY8P0CW00 308 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 GSPT1P15170 499 aaKnown RBP5.34□□□□□ -1.55
NUP54-206ENST00000508465 TGM1P22735 817 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 MCCP23508 829 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 PRMT2P55345 433 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 KLRC3Q07444 240 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 ALX1Q15699 326 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 CCL14Q16627 93 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 SLC35F1Q5T1Q4 408 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 TTC22Q5TAA0 569 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 OTOP3Q7RTS5 596 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 LRRC47Q8N1G4 583 aaKnown RBP5.34□□□□□ -1.55
NUP54-206ENST00000508465 KCTD13Q8WZ19 329 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 CEP95Q96GE4 821 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 MOV10L1Q9BXT6 1211 aaKnown RBP5.34□□□□□ -1.55
NUP54-206ENST00000508465 CDIP1Q9H305 208 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 VCPKMTQ9H867 229 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 IL17RBQ9NRM6 502 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 TOMM22Q9NS69 142 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 DIAPH3Q9NSV4 1193 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 MTMR4Q9NYA4 1195 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 MORF4L1Q9UBU8 362 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 ISY1Q9ULR0 285 aaKnown RBP5.34□□□□□ -1.55
NUP54-206ENST00000508465 OAZ3Q9UMX2 235 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 RABGAP1Q9Y3P9 1069 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 ATAD5Q96QE3 1844 aa5.34□□□□□ -1.55
NUP54-206ENST00000508465 CCDC171Q6TFL3 1326 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms