RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 NOL6Q9H6R4 1146 aaKnown RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 RPAP3Q9H6T3 665 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 SLC38A10Q9HBR0 1119 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 TOPORSQ9NS56 1045 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 CDC23Q9UJX2 597 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 PCDHA7Q9UN72 937 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 GTF2A1LQ9UNN4 478 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 SCAF8Q9UPN6 1271 aaKnown RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 CLIC4Q9Y696 253 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 CYP3A7-CYP3A51PA0A087WV96 503 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 A0A1W2PRQ8 180 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 UBE2Q2LH0YL09 131 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 RGS13O14921 159 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 MSCO60682 206 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 PPP1R11O60927 126 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 CYP3A4P08684 503 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 SETSIPP0DME0 302 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 CYP3A7P24462 503 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 SREBF2Q12772 1141 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 GTF2H3Q13889 308 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 KIAA1755Q5JYT7 1200 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 PIK3AP1Q6ZUJ8 805 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 RASAL3Q86YV0 1011 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 AK8Q96MA6 479 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 FAM210AQ96ND0 272 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 LPIN3Q9BQK8 851 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 PDCL3Q9H2J4 239 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 TBK1Q9UHD2 729 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 POLHQ9Y253 713 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 PTPN22Q9Y2R2 807 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 GIT1Q9Y2X7 761 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 K7ESF4 209 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 AP5Z1O43299 807 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 KINO60870 393 aaKnown RBP7.76□□□□□ -1.17
CLCN3-206ENST00000507875 CLEC3AO75596 197 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 LONP1P36776 959 aaKnown RBP7.76□□□□□ -1.17
CLCN3-206ENST00000507875 RING1Q06587 406 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 BBS9Q3SYG4 887 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 BROXQ5VW32 411 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 TRIM67Q6ZTA4 783 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 SYT9Q86SS6 491 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 LUZP1Q86V48 1076 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 FSIP1Q8NA03 581 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 COA7Q96BR5 231 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 TNIP3Q96KP6 325 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 MBOAT7Q96N66 472 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 NUP88Q99567 741 aaPredicted RBP7.76□□□□□ -1.17
CLCN3-206ENST00000507875 ADAM19Q9H013 955 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 ZCCHC17Q9NP64 241 aaKnown RBP7.76□□□□□ -1.17
CLCN3-206ENST00000507875 DGKBQ9Y6T7 804 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 EFCAB14O75071 495 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 SNRPB2P08579 225 aaKnown RBP7.76□□□□□ -1.17
CLCN3-206ENST00000507875 ZBTB48P10074 688 aaPredicted RBP7.76□□□□□ -1.17
CLCN3-206ENST00000507875 TRPC1P48995 793 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 HSD17B4P51659 736 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 SLC20A2Q08357 652 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 PRKG1Q13976 671 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 RESP18Q5W5W9 173 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 ZNF449Q6P9G9 518 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 ZNF354CQ86Y25 554 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 SLC41A1Q8IVJ1 513 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 FMR1NBQ8N0W7 255 aaPredicted RBP7.76□□□□□ -1.17
CLCN3-206ENST00000507875 ATXN2LQ8WWM7 1075 aaKnown RBP7.76□□□□□ -1.17
CLCN3-206ENST00000507875 TEKT5Q96M29 485 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 TBCBQ99426 244 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 CORO1BQ9BR76 489 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 FBXO40Q9UH90 709 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 HOOK1Q9UJC3 728 aaKnown RBP7.76□□□□□ -1.17
CLCN3-206ENST00000507875 FBXO2Q9UK22 296 aaPredicted RBP7.76□□□□□ -1.17
CLCN3-206ENST00000507875 PCDHGC5Q9Y5F6 944 aa7.76□□□□□ -1.17
CLCN3-206ENST00000507875 SPDYE3A6NKU9 549 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 GCOM1H8Y6P7 765 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-206ENST00000507875 GPR25O00155 361 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 OFD1O75665 1012 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 FLOT1O75955 427 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 POLR2MP0CAP2 368 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 CIITAP33076 1130 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 SREBF1P36956 1147 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 ZNF143P52747 638 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-206ENST00000507875 SNAPC2Q13487 334 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 DPY19L1Q2PZI1 675 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 MOB2Q70IA6 237 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 RASGRP2Q7LDG7 609 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 NIPA1Q7RTP0 329 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 CHST13Q8NET6 341 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 MPP4Q96JB8 637 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 SELENOOQ9BVL4 669 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 GTPBP4Q9BZE4 634 aaKnown RBP7.75□□□□□ -1.17
CLCN3-206ENST00000507875 RAB34Q9BZG1 259 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 NUCKS1Q9H1E3 243 aaKnown RBP7.75□□□□□ -1.17
CLCN3-206ENST00000507875 CPVLQ9H3G5 476 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 GPRC5CQ9NQ84 441 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 TRMT1Q9NXH9 659 aaKnown RBP7.75□□□□□ -1.17
CLCN3-206ENST00000507875 TMEFF2Q9UIK5 374 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-206ENST00000507875 ACAD8Q9UKU7 415 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 AGTPBP1Q9UPW5 1226 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 PCDHB6Q9Y5E3 794 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.75□□□□□ -1.17
CLCN3-206ENST00000507875 ZNF536O15090 1300 aa7.75□□□□□ -1.17
CLCN3-206ENST00000507875 FRMPD4Q14CM0 1322 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms