RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 SOD2P04179 222 aa21.58■■□□□ 1.05
USP53-203ENST00000507597 TPM3P06753 285 aa21.58■■□□□ 1.05
USP53-203ENST00000507597 TRIM21P19474 475 aaKnown RBP21.58■■□□□ 1.05
USP53-203ENST00000507597 PBX3P40426 434 aa21.58■■□□□ 1.05
USP53-203ENST00000507597 CREMQ03060 361 aa21.58■■□□□ 1.05
USP53-203ENST00000507597 ZNF667Q5HYK9 610 aa21.58■■□□□ 1.05
USP53-203ENST00000507597 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.58■■□□□ 1.05
USP53-203ENST00000507597 GBP6Q6ZN66 633 aa21.58■■□□□ 1.05
USP53-203ENST00000507597 SPATA18Q8TC71 538 aa21.58■■□□□ 1.05
USP53-203ENST00000507597 PPP2R3CQ969Q6 453 aa21.58■■□□□ 1.05
USP53-203ENST00000507597 NGRNQ9NPE2 291 aaKnown RBP21.58■■□□□ 1.05
USP53-203ENST00000507597 MARCH5Q9NX47 278 aa21.58■■□□□ 1.05
USP53-203ENST00000507597 GDAP2Q9NXN4 497 aa21.58■■□□□ 1.05
USP53-203ENST00000507597 H7C4K7 107 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 URODP06132 367 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 AARSP49588 968 aaKnown RBP eCLIP21.57■■□□□ 1.04
USP53-203ENST00000507597 KRT31Q15323 416 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 CBWD6Q4V339 395 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 CBWD3Q5JTY5 395 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 CBWD5Q5RIA9 395 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 FAM171A1Q5VUB5 890 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 TMC7Q7Z402 723 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 VPS52Q8N1B4 723 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 TMEM86AQ8N2M4 240 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 TTC39CQ8N584 583 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 SPPL3Q8TCT6 385 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 HASPINQ8TF76 798 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 POF1BQ8WVV4 589 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 RABGGTAQ92696 567 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 TTPALQ9BTX7 342 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 HERC2P3Q9BVR0 1158 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 CERS4Q9HA82 394 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.57■■□□□ 1.04
USP53-203ENST00000507597 PCDHB8Q9UN66 801 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 TRIP11Q15643 1979 aa21.57■■□□□ 1.04
USP53-203ENST00000507597 ANK1P16157 1881 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 PDCD11Q14690 1871 aaKnown RBP21.56■■□□□ 1.04
USP53-203ENST00000507597 M0QZQ0 153 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 CYB561D2O14569 222 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 ITGB1P05556 798 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 TYMPP19971 482 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 COPB1P53618 953 aaKnown RBP21.56■■□□□ 1.04
USP53-203ENST00000507597 MYL6P60660 151 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 EXOC3L4Q17RC7 722 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 WDR72Q3MJ13 1102 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 CEP57Q86XR8 500 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 THEM5Q8N1Q8 247 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 MICAL1Q8TDZ2 1067 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 SENP8Q96LD8 212 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 MMS19Q96T76 1030 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 VPS16Q9H269 839 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 FAM124BQ9H5Z6 455 aaPredicted RBP21.56■■□□□ 1.04
USP53-203ENST00000507597 ENTPD7Q9NQZ7 604 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 TLR9Q9NR96 1032 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 MRPL17Q9NRX2 175 aaKnown RBP21.56■■□□□ 1.04
USP53-203ENST00000507597 TAB2Q9NYJ8 693 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 LMCD1Q9NZU5 365 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 SNX9Q9Y5X1 595 aa21.56■■□□□ 1.04
USP53-203ENST00000507597 ARHGEF15O94989 841 aa21.55■■□□□ 1.04
USP53-203ENST00000507597 VNN1O95497 513 aa21.55■■□□□ 1.04
USP53-203ENST00000507597 ASS1P00966 412 aaKnown RBP21.55■■□□□ 1.04
USP53-203ENST00000507597 BRCC3P46736 316 aa21.55■■□□□ 1.04
USP53-203ENST00000507597 GLUD2P49448 558 aa21.55■■□□□ 1.04
USP53-203ENST00000507597 YWHAEP62258 255 aaKnown RBP21.55■■□□□ 1.04
USP53-203ENST00000507597 SMC1AQ14683 1233 aaKnown RBP21.55■■□□□ 1.04
USP53-203ENST00000507597 TIGD5Q53EQ6 642 aa21.55■■□□□ 1.04
USP53-203ENST00000507597 ANKS3Q6ZW76 656 aa21.55■■□□□ 1.04
USP53-203ENST00000507597 TOP6BLQ8N6T0 577 aa21.55■■□□□ 1.04
USP53-203ENST00000507597 EHBP1Q8NDI1 1231 aa21.55■■□□□ 1.04
USP53-203ENST00000507597 C3orf58Q8NDZ4 430 aa21.55■■□□□ 1.04
USP53-203ENST00000507597 CXorf38Q8TB03 319 aa21.55■■□□□ 1.04
USP53-203ENST00000507597 TAS1R2Q8TE23 839 aa21.55■■□□□ 1.04
USP53-203ENST00000507597 GAS2L1Q99501 681 aaPredicted RBP21.55■■□□□ 1.04
USP53-203ENST00000507597 ALG13Q9NP73 1137 aaKnown RBP21.55■■□□□ 1.04
USP53-203ENST00000507597 CACNG4Q9UBN1 327 aa21.55■■□□□ 1.04
USP53-203ENST00000507597 CBFA2T2O43439 604 aa21.54■■□□□ 1.04
USP53-203ENST00000507597 CTSAP10619 480 aa21.54■■□□□ 1.04
USP53-203ENST00000507597 TBXAS1P24557 533 aaPredicted RBP21.54■■□□□ 1.04
USP53-203ENST00000507597 CA8P35219 290 aa21.54■■□□□ 1.04
USP53-203ENST00000507597 LHX1P48742 406 aa21.54■■□□□ 1.04
USP53-203ENST00000507597 YWHAHQ04917 246 aaPredicted RBP21.54■■□□□ 1.04
USP53-203ENST00000507597 TMEM173Q86WV6 379 aaPredicted RBP21.54■■□□□ 1.04
USP53-203ENST00000507597 RNF214Q8ND24 703 aa21.54■■□□□ 1.04
USP53-203ENST00000507597 NT5C1BQ96P26 610 aa21.54■■□□□ 1.04
USP53-203ENST00000507597 EMILIN2Q9BXX0 1053 aa21.54■■□□□ 1.04
USP53-203ENST00000507597 GPR62Q9BZJ7 368 aa21.54■■□□□ 1.04
USP53-203ENST00000507597 CHST7Q9NS84 486 aa21.54■■□□□ 1.04
USP53-203ENST00000507597 GCNT4Q9P109 453 aa21.54■■□□□ 1.04
USP53-203ENST00000507597 NXF1Q9UBU9 619 aaKnown RBP21.54■■□□□ 1.04
USP53-203ENST00000507597 GBF1Q92538 1859 aa21.54■■□□□ 1.04
USP53-203ENST00000507597 FSD2A1L4K1 749 aa21.53■■□□□ 1.04
USP53-203ENST00000507597 PPEF2O14830 753 aa21.53■■□□□ 1.04
USP53-203ENST00000507597 CXCL14O95715 111 aa21.53■■□□□ 1.04
USP53-203ENST00000507597 CYP11A1P05108 521 aa21.53■■□□□ 1.04
USP53-203ENST00000507597 FGFR3P22607 806 aa21.53■■□□□ 1.04
USP53-203ENST00000507597 NOP14P78316 857 aaKnown RBP21.53■■□□□ 1.04
USP53-203ENST00000507597 DSG1Q02413 1049 aa21.53■■□□□ 1.04
USP53-203ENST00000507597 UBXN1Q04323 297 aa21.53■■□□□ 1.04
USP53-203ENST00000507597 SMYD5Q6GMV2 418 aa21.53■■□□□ 1.04
USP53-203ENST00000507597 RNF168Q8IYW5 571 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms