RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 PARM1Q6UWI2 310 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 EPSTI1Q96J88 318 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 NELL2Q99435 816 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 BACH2Q9BYV9 841 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 HAPLN2Q9GZV7 340 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 OLFML3Q9NRN5 406 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 AGO2Q9UKV8 859 aaKnown RBP15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 SIT1Q9Y3P8 196 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 PCDHB13Q9Y5F0 798 aa15.65■□□□□ 0.1
HMGCS1-203ENST00000507004 IL18RAPO95256 599 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 FGF19O95750 216 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 NMT1P30419 496 aaKnown RBP15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 TNFSF9P41273 254 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 GPC5P78333 572 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 ADCY1Q08828 1119 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 GPR17Q13304 367 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 OVOS1Q6IE37 1185 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 STXBP4Q6ZWJ1 553 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 DNASE1L2Q92874 299 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 E2F7Q96AV8 911 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 ELSPBP1Q96BH3 223 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 FAM212AQ96EL1 285 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 ACCSQ96QU6 501 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 CORO1BQ9BR76 489 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 MRPL44Q9H9J2 332 aaKnown RBP15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 ASAH2Q9NR71 780 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 HCFC1R1Q9NWW0 138 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 MRPS17Q9Y2R5 130 aaKnown RBP15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 ASB3Q9Y575 518 aa15.64■□□□□ 0.09
HMGCS1-203ENST00000507004 DOCK6Q96HP0 2047 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 KIAA0391O15091 583 aaKnown RBP15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 NCAM2O15394 837 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 STX6O43752 255 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 PNPLA4P41247 253 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 STAT6P42226 847 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 EPHB3P54753 998 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 EPHA5P54756 1037 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 LILRA4P59901 499 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 ANGPT1Q15389 498 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 MLF2Q15773 248 aaPredicted RBP15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 PRSS36Q5K4E3 855 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 JADE1Q6IE81 842 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 METTL23Q86XA0 190 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 LRRC15Q8TF66 581 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 POMGNT1Q8WZA1 660 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 NKD2Q969F2 451 aaPredicted RBP15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 ZNF396Q96N95 335 aaPredicted RBP15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 CUEDC2Q9H467 287 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 TMEM206Q9H813 350 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 ZFP14Q9HCL3 533 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 FAM86C1Q9NVL1 165 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 MTMR6Q9Y217 621 aa15.63■□□□□ 0.09
HMGCS1-203ENST00000507004 KANSL1LA0AUZ9 987 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 ANO9A1A5B4 782 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 PIRO00625 290 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 PI15O43692 258 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 PPP1R37O75864 691 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 SEC24AO95486 1093 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 CYP11A1P05108 521 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 GARTP22102 1010 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 ALDH1A3P47895 512 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 NASPP49321 788 aaPredicted RBP15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 TAF6P49848 677 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 AMPD3Q01432 767 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 SPAG1Q07617 926 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 TWF1Q12792 350 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 SLC44A4Q53GD3 710 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 L1TD1Q5T7N2 865 aaKnown RBP15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 C9orf57Q5W0N0 161 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 SLC39A4Q6P5W5 647 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 ZC3H14Q6PJT7 736 aaKnown RBP15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 DYMQ7RTS9 669 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 ITIH5Q86UX2 942 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 SFR1Q86XK3 245 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 CCDC65Q8IXS2 484 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 THEM5Q8N1Q8 247 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 PJA1Q8NG27 643 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 C2orf15Q8WU43 125 aaKnown RBP15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 DEPDC1BQ8WUY9 529 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 MCRS1Q96EZ8 462 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 SENP8Q96LD8 212 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 ZNF560Q96MR9 790 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 PHOX2BQ99453 314 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 DDX23Q9BUQ8 820 aaKnown RBP15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 BCO2Q9BYV7 579 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 ZMYM5Q9UJ78 669 aa15.62■□□□□ 0.09
HMGCS1-203ENST00000507004 PPP6R2O75170 966 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 TUFMP49411 452 aaKnown RBP15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 ACOT2P49753 483 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 STK38Q15208 465 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 SLC5A9Q2M3M2 681 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 ZC2HC1CQ53FD0 456 aaPredicted RBP15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 SPECC1Q5M775 1068 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 ZBTB41Q5SVQ8 909 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 C1orf228Q6PIY5 440 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 RNF19BQ6ZMZ0 732 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 USP49Q70CQ1 688 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 CACTINQ8WUQ7 758 aaKnown RBP15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 ING5Q8WYH8 240 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 SMARCD2Q92925 531 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms