RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 YEATS4O95619 227 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 FGFR1P11362 822 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 ZSCAN20P17040 1043 aaPredicted RBP10.45□□□□□ -0.74
CLCN3-205ENST00000506924 CDC25BP30305 580 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 ME1P48163 572 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 PTENP60484 403 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 MBTD1Q05BQ5 628 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 ARSHQ5FYA8 562 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 HP1BP3Q5SSJ5 553 aaPredicted RBP10.45□□□□□ -0.74
CLCN3-205ENST00000506924 RRAGBQ5VZM2 374 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 SRGAP1Q7Z6B7 1085 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 GPBP1Q86WP2 473 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 CDR2LQ86X02 465 aaPredicted RBP10.45□□□□□ -0.74
CLCN3-205ENST00000506924 DAW1Q8N136 415 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 TMEM130Q8N3G9 435 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 SYT2Q8N9I0 419 aaPredicted RBP10.45□□□□□ -0.74
CLCN3-205ENST00000506924 RAD54LQ92698 747 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 MRRFQ96E11 262 aaKnown RBP10.45□□□□□ -0.74
CLCN3-205ENST00000506924 CCSER1Q9C0I3 900 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 BLOC1S4Q9NUP1 217 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 CFAP45Q9UL16 551 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 PCDHA7Q9UN72 937 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 PCDHB7Q9Y5E2 793 aa10.45□□□□□ -0.74
CLCN3-205ENST00000506924 ADGRA3Q8IWK6 1321 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 LINC01553A4QN01 128 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 CCDC169A6NNP5 214 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 C9IYK1 514 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 CUTAO60888 179 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 PPP6R2O75170 966 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 ERLIN2O94905 339 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 SARSP49591 514 aaKnown RBP10.44□□□□□ -0.74
CLCN3-205ENST00000506924 PEX3P56589 373 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 TAP1Q03518 808 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 MAPK7Q13164 816 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 SCARA3Q6AZY7 606 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 TWF2Q6IBS0 349 aaKnown RBP10.44□□□□□ -0.74
CLCN3-205ENST00000506924 SHC4Q6S5L8 630 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 SLC24A5Q71RS6 500 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 DEPTORQ8TB45 409 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 ARNTL2Q8WYA1 636 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 LPPQ93052 612 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 IFT74Q96LB3 600 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 GUCD1Q96NT3 240 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 NRSN2Q9GZP1 204 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 ZHX3Q9H4I2 956 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 PRDM12Q9H4Q4 367 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 MTMR10Q9NXD2 777 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 CCDC39Q9UFE4 941 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 GPN3Q9UHW5 284 aaPredicted RBP10.44□□□□□ -0.74
CLCN3-205ENST00000506924 INSL6Q9Y581 213 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 TTC3P53804 2025 aa10.44□□□□□ -0.74
CLCN3-205ENST00000506924 EPOPA6NHQ4 379 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 TBKBP1A7MCY6 615 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 FAM229AH3BQW9 127 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 TSPAN1O60635 241 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 DGKIO75912 1065 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 KRT18P05783 430 aaKnown RBP10.43□□□□□ -0.74
CLCN3-205ENST00000506924 STAG3L1P0CL83 205 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 HOXA11P31270 313 aaPredicted RBP10.43□□□□□ -0.74
CLCN3-205ENST00000506924 DDIT3P35638 169 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 ANP32AP39687 249 aaKnown RBP10.43□□□□□ -0.74
CLCN3-205ENST00000506924 STAT6P42226 847 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 NAMPTP43490 491 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 KRT85P78386 507 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 HTRA4P83105 476 aaPredicted RBP10.43□□□□□ -0.74
CLCN3-205ENST00000506924 GSTM4Q03013 218 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 NAALADL2Q58DX5 795 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 AXDND1Q5T1B0 1012 aaPredicted RBP10.43□□□□□ -0.74
CLCN3-205ENST00000506924 DYMQ7RTS9 669 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 ECHDC2Q86YB7 292 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 ZBTB8OSQ8IWT0 167 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 KCNG4Q8TDN1 519 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 LEO1Q8WVC0 666 aaPredicted RBP10.43□□□□□ -0.74
CLCN3-205ENST00000506924 MYLIPQ8WY64 445 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 LARP4BQ92615 738 aaKnown RBP10.43□□□□□ -0.74
CLCN3-205ENST00000506924 STAMQ92783 540 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 KIFAP3Q92845 792 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 SPATA32Q96LK8 384 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 CDX2Q99626 313 aaPredicted RBP10.43□□□□□ -0.74
CLCN3-205ENST00000506924 REEP2Q9BRK0 252 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 C17orf80Q9BSJ5 609 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 EIF2AQ9BY44 585 aaKnown RBP10.43□□□□□ -0.74
CLCN3-205ENST00000506924 C1orf112Q9NSG2 853 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 AGPAT5Q9NUQ2 364 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 RCOR1Q9UKL0 485 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 TCHHQ07283 1943 aa10.43□□□□□ -0.74
CLCN3-205ENST00000506924 MEIS3P2A8K0S8 358 aa10.42□□□□□ -0.74
CLCN3-205ENST00000506924 ENC1O14682 589 aa10.42□□□□□ -0.74
CLCN3-205ENST00000506924 SLC16A4O15374 487 aa10.42□□□□□ -0.74
CLCN3-205ENST00000506924 SLC26A4O43511 780 aa10.42□□□□□ -0.74
CLCN3-205ENST00000506924 CSPG5O95196 566 aa10.42□□□□□ -0.74
CLCN3-205ENST00000506924 EDN1P05305 212 aa10.42□□□□□ -0.74
CLCN3-205ENST00000506924 PRKCBP05771 671 aa10.42□□□□□ -0.74
CLCN3-205ENST00000506924 ATF7P17544 494 aaPredicted RBP10.42□□□□□ -0.74
CLCN3-205ENST00000506924 ARF4P18085 180 aaPredicted RBP10.42□□□□□ -0.74
CLCN3-205ENST00000506924 GUCY2CP25092 1073 aa10.42□□□□□ -0.74
CLCN3-205ENST00000506924 NPTX2P47972 431 aa10.42□□□□□ -0.74
CLCN3-205ENST00000506924 GSK3AP49840 483 aa10.42□□□□□ -0.74
CLCN3-205ENST00000506924 FAM189BP81408 668 aa10.42□□□□□ -0.74
CLCN3-205ENST00000506924 POU5F1BQ06416 359 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms