RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 FGFR3P22607 806 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 ATICP31939 592 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 FMO5P49326 533 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 MXI1P50539 228 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 MYL6P60660 151 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 KCNH2Q12809 1159 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 BIRC3Q13489 604 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 NCOA4Q13772 614 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 KCNJ12Q14500 433 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 SV2CQ496J9 727 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 HSP90AA4PQ58FG1 418 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 TCP11X2Q5H9J9 407 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 KIAA0319Q5VV43 1072 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-210ENST00000506767 GPR65Q8IYL9 337 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 VPS52Q8N1B4 723 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 TAS1R2Q8TE23 839 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 HPDLQ96IR7 371 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 CBX8Q9HC52 389 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 TLR9Q9NR96 1032 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 GDAP2Q9NXN4 497 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 LMCD1Q9NZU5 365 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 IRAK3Q9Y616 596 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 VWA8A3KMH1 1905 aa13.83□□□□□ -0.2
TCOF1-210ENST00000506767 LRRC10BA6NIK2 292 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 I3L4J1 428 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 SYN3O14994 580 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 P4HA2O15460 535 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 LILRB3O75022 631 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 PHACTR2O75167 634 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 HLA-DRAP01903 254 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 AFPP02771 609 aaKnown RBP13.82□□□□□ -0.2
TCOF1-210ENST00000506767 MTIF2P46199 727 aaKnown RBP13.82□□□□□ -0.2
TCOF1-210ENST00000506767 DSG1Q02413 1049 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 MYO1EQ12965 1108 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 TRPC3Q13507 836 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 MRPL58Q14197 206 aaKnown RBP13.82□□□□□ -0.2
TCOF1-210ENST00000506767 ADGRE1Q14246 886 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 MAN2A1Q16706 1144 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 SGSM1Q2NKQ1 1148 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 USP41Q3LFD5 358 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 MIIPQ5JXC2 388 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 FAM171A1Q5VUB5 890 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 PDE12Q6L8Q7 609 aaKnown RBP13.82□□□□□ -0.2
TCOF1-210ENST00000506767 LIMS2Q7Z4I7 341 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 FAM200AQ8TCP9 573 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 TAF4BQ92750 862 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 SENP8Q96LD8 212 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 GUCD1Q96NT3 240 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 TUBGCP2Q9BSJ2 902 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 TSPY26PQ9H489 355 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 MMRN2Q9H8L6 949 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 MAGEC2Q9UBF1 373 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-210ENST00000506767 PCDHB8Q9UN66 801 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 CHD7Q9P2D1 2997 aa13.82□□□□□ -0.2
TCOF1-210ENST00000506767 N4BP1O75113 896 aaKnown RBP13.81□□□□□ -0.2
TCOF1-210ENST00000506767 LRRN2O75325 713 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 ASS1P00966 412 aaKnown RBP13.81□□□□□ -0.2
TCOF1-210ENST00000506767 CYP11A1P05108 521 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 TYMPP19971 482 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 TKTP29401 623 aaKnown RBP13.81□□□□□ -0.2
TCOF1-210ENST00000506767 IRS1P35568 1242 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 GLUD2P49448 558 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 PTPROQ16827 1216 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 RTP2Q5QGT7 225 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 DSTYKQ6XUX3 929 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 APTXQ7Z2E3 356 aaKnown RBP13.81□□□□□ -0.2
TCOF1-210ENST00000506767 LUZP1Q86V48 1076 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 CREBRFQ8IUR6 639 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 FBXL13Q8NEE6 735 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 LMO3Q8TAP4 145 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 SEMA4DQ92854 862 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 MRPL38Q96DV4 380 aaKnown RBP13.81□□□□□ -0.2
TCOF1-210ENST00000506767 B3GALT6Q96L58 329 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 TCF25Q9BQ70 676 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 TTPALQ9BTX7 342 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 NGRNQ9NPE2 291 aaKnown RBP13.81□□□□□ -0.2
TCOF1-210ENST00000506767 RAB20Q9NX57 234 aa13.81□□□□□ -0.2
TCOF1-210ENST00000506767 LIMA1Q9UHB6 759 aaKnown RBP13.81□□□□□ -0.2
TCOF1-210ENST00000506767 R3HCC1Q9Y3T6 440 aaKnown RBP13.81□□□□□ -0.2
TCOF1-210ENST00000506767 TSC2P49815 1807 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 BECN2A8MW95 431 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 CYB561D2O14569 222 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 OAZ2O95190 189 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 PIK3CAP42336 1068 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 SMC1AQ14683 1233 aaKnown RBP13.8□□□□□ -0.2
TCOF1-210ENST00000506767 KRT31Q15323 416 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 PTPN14Q15678 1187 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 VWA3BQ502W6 1294 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 DPH6Q7L8W6 267 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 TMC7Q7Z402 723 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 TOP6BLQ8N6T0 577 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 MRPL43Q8N983 215 aaKnown RBP13.8□□□□□ -0.2
TCOF1-210ENST00000506767 LNX1Q8TBB1 728 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-210ENST00000506767 PIK3R5Q8WYR1 880 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 CDX2Q99626 313 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-210ENST00000506767 NDST4Q9H3R1 872 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 RXFP1Q9HBX9 757 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 SSX2IPQ9Y2D8 614 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 SNX9Q9Y5X1 595 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms