RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 CFAP97Q9P2B7 532 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 MED16Q9Y2X0 877 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZDHHC9Q9Y397 364 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 ATRNL1Q5VV63 1379 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 ABCC10Q5T3U5 1492 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 TRIM43BA6NCK2 446 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 HNRNPDLO14979 420 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 PLA2G6O60733 806 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 SKAP2O75563 359 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 MATN4O95460 622 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 CSTBP04080 98 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 ANXA2P07355 339 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZNF888P0CJ79 500 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 HARSP12081 509 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 ATP5JP18859 108 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 CD53P19397 219 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 CSF2RBP32927 897 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 ALDH1A3P47895 512 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 GZMKP49863 264 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 NPEPPSP55786 919 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 RPS16P62249 146 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 NOMO3P69849 1222 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 MXRA7P84157 204 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 SLC13A2Q13183 592 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 RAB32Q13637 225 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 MPEG1Q2M385 716 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 CCDC93Q567U6 631 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 MFSD14BQ5SR56 506 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZFYVE27Q5T4F4 411 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 AFMIDQ63HM1 303 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 CCDC70Q6NSX1 233 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 CNKSR3Q6P9H4 555 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 LDHAL6AQ6ZMR3 332 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 SEM1Q6ZVN7 128 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 C1QL4Q86Z23 238 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 CMTM4Q8IZR5 234 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 SDR16C5Q8N3Y7 309 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 AOPEPQ8N6M6 819 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 DCBLD1Q8N8Z6 715 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 GIMAP8Q8ND71 665 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 NLGN4YQ8NFZ3 816 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 TRIM43Q96BQ3 446 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 IQCDQ96DY2 449 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 LTV1Q96GA3 475 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 RPL10LQ96L21 214 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 PWWP2AQ96N64 755 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 SPATA25Q9BR10 227 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 ISCA1Q9BUE6 129 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 PACSIN1Q9BY11 444 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 EIF2AQ9BY44 585 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZNF518BQ9C0D4 1074 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 BRD9Q9H8M2 597 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 RLIMQ9NVW2 624 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 NCDNQ9UBB6 729 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 MYO1AQ9UBC5 1043 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 SRRDQ9UH36 339 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 ADAM29Q9UKF5 820 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 PNMA2Q9UL42 364 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 MAPKBP1O60336 1514 aa3.85□□□□□ -1.79
TRAPPC11-205ENST00000506426 KIF13AQ9H1H9 1805 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 GOLGA6L3A6NEY3 463 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 PRRG2O14669 202 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 KIAA0391O15091 583 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 ARHGAP6O43182 974 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 THAP12O43422 761 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 SLC43A1O75387 559 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 ABHD16AO95870 558 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 MT-ND5P03915 603 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 GNAI2P04899 355 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 GJB1P08034 283 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 SNRPA1P09661 255 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 SBK3P0C264 359 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 HSD3B1P14060 373 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 FGFR2P21802 821 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 EEF1GP26641 437 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 PHKA1P46020 1223 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 ALDH9A1P49189 494 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 HTRA4P83105 476 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 CAP1Q01518 475 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 CTBP1Q13363 440 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 MRPL49Q13405 166 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 KIF22Q14807 665 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 ACAP1Q15027 740 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 SLC35G1Q2M3R5 365 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZNF568Q3ZCX4 644 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 LMBRD2Q68DH5 695 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 MCTP2Q6DN12 878 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 GGT6Q6P531 493 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 PCSK9Q8NBP7 692 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 TXNDC5Q8NBS9 432 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 OR10H5Q8NGA6 315 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 OR14K1Q8NGZ2 314 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 RABGGTAQ92696 567 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 DDX17Q92841 729 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 SNX22Q96L94 193 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 MYOCQ99972 504 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 PAGR1Q9BTK6 254 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms