RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 EPB41L1Q9H4G0 881 aa16.82■□□□□ 0.28
SCLT1-208ENST00000506368 KIAA1586Q9HCI6 787 aa16.82■□□□□ 0.28
SCLT1-208ENST00000506368 SLCO1B3Q9NPD5 702 aa16.82■□□□□ 0.28
SCLT1-208ENST00000506368 RABGAP1Q9Y3P9 1069 aa16.82■□□□□ 0.28
SCLT1-208ENST00000506368 CDK5RAP2Q96SN8 1893 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 FAM196BA6NMK8 535 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 KRT36O76013 467 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 PABPC4LP0CB38 370 aaKnown RBP16.81■□□□□ 0.28
SCLT1-208ENST00000506368 CLCN2P51788 898 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 XIAPP98170 497 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 TRMT5Q32P41 509 aaKnown RBP16.81■□□□□ 0.28
SCLT1-208ENST00000506368 NET1Q7Z628 596 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-208ENST00000506368 ADGRG6Q86SQ4 1221 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 ANO3Q9BYT9 981 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 SUDS3Q9H7L9 328 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-208ENST00000506368 GPAMQ9HCL2 828 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 MTMR4Q9NYA4 1195 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 POLIQ9UNA4 740 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 COQ9O75208 318 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 CETN2P41208 172 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 AP2B1P63010 937 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 MCL1Q07820 350 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 IZUMO3Q5VZ72 239 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 RFWD3Q6PCD5 774 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 MARK2Q7KZI7 788 aaKnown RBP16.81■□□□□ 0.28
SCLT1-208ENST00000506368 TRIM74Q86UV6 250 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 TRIM73Q86UV7 250 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 ADGRF4Q8IZF3 695 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 SLC20A1Q8WUM9 679 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 RBM15Q96T37 977 aaKnown RBP eCLIP16.81■□□□□ 0.287e-8■■■■□ 26.4
SCLT1-208ENST00000506368 POP1Q99575 1024 aaKnown RBP16.81■□□□□ 0.28
SCLT1-208ENST00000506368 KRT82Q9NSB4 513 aa16.81■□□□□ 0.28
SCLT1-208ENST00000506368 PSMC3IPQ9P2W1 217 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-208ENST00000506368 NFASCO94856 1347 aa16.8■□□□□ 0.28
SCLT1-208ENST00000506368 FRMPD2Q68DX3 1309 aaPredicted RBP16.8■□□□□ 0.28
SCLT1-208ENST00000506368 PIK3CDO00329 1044 aa16.8■□□□□ 0.28
SCLT1-208ENST00000506368 ATP2A1O14983 1001 aa16.8■□□□□ 0.28
SCLT1-208ENST00000506368 CDK16Q00536 496 aa16.8■□□□□ 0.28
SCLT1-208ENST00000506368 ITGA9Q13797 1035 aa16.8■□□□□ 0.28
SCLT1-208ENST00000506368 SEPT7Q16181 437 aaKnown RBP16.8■□□□□ 0.28
SCLT1-208ENST00000506368 MAPKAPK5Q8IW41 473 aa16.8■□□□□ 0.28
SCLT1-208ENST00000506368 ZNF653Q96CK0 615 aa16.8■□□□□ 0.28
SCLT1-208ENST00000506368 RUSC1Q9BVN2 902 aa16.8■□□□□ 0.28
SCLT1-208ENST00000506368 UBE2OQ9C0C9 1292 aaKnown RBP16.8■□□□□ 0.28
SCLT1-208ENST00000506368 PARVGQ9HBI0 331 aa16.8■□□□□ 0.28
SCLT1-208ENST00000506368 UBE2TQ9NPD8 197 aaPredicted RBP16.8■□□□□ 0.28
SCLT1-208ENST00000506368 CHST7Q9NS84 486 aa16.8■□□□□ 0.28
SCLT1-208ENST00000506368 ZDHHC7Q9NXF8 308 aa16.8■□□□□ 0.28
SCLT1-208ENST00000506368 LRRN2O75325 713 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 SPAG7O75391 227 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 BBOX1O75936 387 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 CCDC166P0CW27 439 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 ESRRAP11474 423 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-208ENST00000506368 RPA3P35244 121 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-208ENST00000506368 ARHGAP4P98171 946 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 WDR72Q3MJ13 1102 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 SEPT14Q6ZU15 432 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 ACAD11Q709F0 780 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 NCAPG2Q86XI2 1143 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 TMPRSS6Q8IU80 811 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 CCNJLQ8IV13 435 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 FAM71AQ8IYT1 594 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 PDCD7Q8N8D1 485 aaKnown RBP16.79■□□□□ 0.28
SCLT1-208ENST00000506368 CCDC110Q8TBZ0 833 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 EPS8L1Q8TE68 723 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 CRYGNQ8WXF5 182 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 SKA1Q96BD8 255 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 TRIM11Q96F44 468 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 GPR101Q96P66 508 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-208ENST00000506368 AGPAT3Q9NRZ7 376 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 NOCTQ9UK39 431 aaKnown RBP16.79■□□□□ 0.28
SCLT1-208ENST00000506368 LRRC37AA6NMS7 1700 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 ATP9BO43861 1147 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 FKBP6O75344 327 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 RRM1P23921 792 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 KLRK1P26718 216 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 GCAP28676 217 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 ARFIP2P53365 341 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 PSMC6P62333 389 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 HNRNPDQ14103 355 aaKnown RBP16.79■□□□□ 0.28
SCLT1-208ENST00000506368 RINT1Q6NUQ1 792 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 LVRNQ6Q4G3 990 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 SLF2Q8IX21 1173 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 SCYL3Q8IZE3 742 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 IRGQQ8WZA9 623 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 C9orf72Q96LT7 481 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 RTFDC1Q9BY42 306 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-208ENST00000506368 BHMT2Q9H2M3 363 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 TUFT1Q9NNX1 390 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 NPHS2Q9NP85 383 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 AVENQ9NQS1 362 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-208ENST00000506368 IRS2Q9Y4H2 1338 aa16.79■□□□□ 0.28
SCLT1-208ENST00000506368 IGKV6D-41A0A0C4DH26 115 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 BTBD19C9JJ37 291 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 SMAPO00193 183 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 CIB2O75838 187 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 FOSP01100 380 aaPredicted RBP16.78■□□□□ 0.28
SCLT1-208ENST00000506368 MYBL1P10243 752 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 RARBP10826 455 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 GPSM2P81274 684 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms