RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	ZNF512	Q96ME7	567 aa	Predicted RBP	11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	CLIC6	Q96NY7	704 aa		11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	ACCS	Q96QU6	501 aa		11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	USP28	Q96RU2	1077 aa		11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	HAPLN2	Q9GZV7	340 aa		11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	AFF4	Q9UHB7	1163 aa	Known RBP	11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	CPSF3	Q9UKF6	684 aa	Known RBP	11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	AGO2	Q9UKV8	859 aa	Known RBP	11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	ATP6V1D	Q9Y5K8	247 aa		11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	NUMBL	Q9Y6R0	609 aa		11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	NOTCH4	Q99466	2003 aa		11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	MIA3	Q5JRA6	1907 aa		11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	WDFY4	Q6ZS81	3184 aa		11.3	□□□□□ -0.6
NR1I3-222	ENST00000506018	OR6C75	A6NL08	312 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018		M0QZQ0	153 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	NARS	O43776	548 aa	Known RBP	11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	TBC1D4	O60343	1298 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	IL18RAP	O95256	599 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	GCNT3	O95395	438 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	LDHA	P00338	332 aa	Known RBP	11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	ADRB2	P07550	413 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	AOC1	P19801	751 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	IGFBP6	P24592	240 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	NASP	P49321	788 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	PSEN1	P49768	467 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	NTHL1	P78549	312 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	AMPD3	Q01432	767 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	PFKP	Q01813	784 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	ADCY1	Q08828	1119 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	TCF15	Q12870	199 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	ZBTB6	Q15916	424 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	CYP4A22	Q5TCH4	519 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	SPATA1	Q5VX52	437 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	JADE1	Q6IE81	842 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	ARMCX5	Q6P1M9	558 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	USP49	Q70CQ1	688 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	PDZD4	Q76G19	769 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	CCDC65	Q8IXS2	484 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	TMEM105	Q8N8V8	129 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	LEMD2	Q8NC56	503 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	FIZ1	Q96SL8	496 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	CUEDC2	Q9H467	287 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	AVEN	Q9NQS1	362 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	SLC2A4RG	Q9NR83	387 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	OLFML3	Q9NRN5	406 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	GDE1	Q9NZC3	331 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	DNMT3B	Q9UBC3	853 aa	Known RBP	11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	DSE	Q9UL01	958 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	C2CD2	Q9Y426	696 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	INSL5	Q9Y5Q6	135 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	SCN1A	P35498	2009 aa		11.29	□□□□□ -0.6
NR1I3-222	ENST00000506018	SPTLC2	O15270	562 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	MEFV	O15553	781 aa	Predicted RBP	11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	FAM189A1	O60320	539 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	PPP6R2	O75170	966 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	OAZ2	O95190	189 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	RHO	P08100	348 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	TYMP	P19971	482 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	ACOT2	P49753	483 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	L1TD1	Q5T7N2	865 aa	Known RBP	11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	OVOS1	Q6IE37	1185 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	METTL23	Q86XA0	190 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	ITFG1	Q8TB96	612 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	GPR152	Q8TDT2	470 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	CORO1B	Q9BR76	489 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	TMEM206	Q9H813	350 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	ASAH2	Q9NR71	780 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	ARHGEF3	Q9NR81	526 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	PANK4	Q9NVE7	773 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	HCFC1R1	Q9NWW0	138 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	CA14	Q9ULX7	337 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	STYXL1	Q9Y6J8	313 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	CACNA1H	O95180	2353 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	MYMK	A6NI61	221 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	ANKRD63	C9JTQ0	380 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	TULP1	O00294	542 aa	Predicted RBP	11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	MICAL2	O94851	1124 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	YEATS4	O95619	227 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	ALDH1A3	P47895	512 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	AARS	P49588	968 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	TAF6	P49848	677 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	EPHB3	P54753	998 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	LILRA4	P59901	499 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	MYBPC2	Q14324	1141 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	ZBTB41	Q5SVQ8	909 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	C9orf57	Q5W0N0	161 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	CWF19L1	Q69YN2	538 aa	Known RBP	11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	PHLDB3	Q6NSJ2	640 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	SLC39A4	Q6P5W5	647 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	PARM1	Q6UWI2	310 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	NPAS3	Q8IXF0	933 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	THEM5	Q8N1Q8	247 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	PDILT	Q8N807	584 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	LINC00301	Q8NCQ3	95 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	CACTIN	Q8WUQ7	758 aa	Known RBP	11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	ING5	Q8WYH8	240 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	FGF14	Q92915	247 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	DNAJC19	Q96DA6	116 aa		11.28	□□□□□ -0.6
NR1I3-222	ENST00000506018	SENP8	Q96LD8	212 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms