RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 NR3C1P04150 777 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 ASGR2P07307 311 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 WEE2P0C1S8 567 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 EPCAMP16422 314 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 CYP3A5P20815 502 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 SNRNP35Q16560 246 aaKnown RBP18.25■□□□□ 0.51
SYNE4-207ENST00000505054 ATAT1Q5SQI0 421 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 SPATA1Q5VX52 437 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 FUT10Q6P4F1 479 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 TAS1R1Q7RTX1 841 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 SLC9A9Q8IVB4 645 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 ADSSL1Q8N142 457 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 AUTS2Q8WXX7 1259 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 FAM84AQ96KN4 292 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 HERC2P3Q9BVR0 1158 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 GPR62Q9BZJ7 368 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 SMOC2Q9H3U7 446 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 KIAA1586Q9HCI6 787 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 PDE11AQ9HCR9 933 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 KIAA1468Q9P260 1216 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 C2CD2Q9Y426 696 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 ZNF233A6NK53 670 aa18.24■□□□□ 0.51
SYNE4-207ENST00000505054 TADA2AO75478 443 aa18.24■□□□□ 0.51
SYNE4-207ENST00000505054 CD44P16070 742 aaKnown RBP18.24■□□□□ 0.51
SYNE4-207ENST00000505054 LRPAP1P30533 357 aa18.24■□□□□ 0.51
SYNE4-207ENST00000505054 NBL1P41271 181 aa18.24■□□□□ 0.51
SYNE4-207ENST00000505054 ASTLQ6HA08 431 aaPredicted RBP18.24■□□□□ 0.51
SYNE4-207ENST00000505054 DCLRE1AQ6PJP8 1040 aa18.24■□□□□ 0.51
SYNE4-207ENST00000505054 PPFIBP1Q86W92 1011 aa18.24■□□□□ 0.51
SYNE4-207ENST00000505054 C12orf76Q8N812 135 aaPredicted RBP18.24■□□□□ 0.51
SYNE4-207ENST00000505054 RDH13Q8NBN7 331 aa18.24■□□□□ 0.51
SYNE4-207ENST00000505054 SLC22A17Q8WUG5 538 aa18.24■□□□□ 0.51
SYNE4-207ENST00000505054 DDX27Q96GQ7 796 aaKnown RBP18.24■□□□□ 0.51
SYNE4-207ENST00000505054 GTPBP4Q9BZE4 634 aaKnown RBP18.24■□□□□ 0.51
SYNE4-207ENST00000505054 GZF1Q9H116 711 aaPredicted RBP18.24■□□□□ 0.51
SYNE4-207ENST00000505054 NUP62CLQ9H1M0 184 aa18.24■□□□□ 0.51
SYNE4-207ENST00000505054 SFXN1Q9H9B4 322 aa18.24■□□□□ 0.51
SYNE4-207ENST00000505054 STK39Q9UEW8 545 aa18.24■□□□□ 0.51
SYNE4-207ENST00000505054 ANK1P16157 1881 aa18.24■□□□□ 0.51
SYNE4-207ENST00000505054 SF3B1O75533 1304 aaKnown RBP eCLIP18.23■□□□□ 0.51
SYNE4-207ENST00000505054 PTPRJQ12913 1337 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 PPEF2O14830 753 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 CALUO43852 315 aaPredicted RBP18.23■□□□□ 0.51
SYNE4-207ENST00000505054 EXOC3O60645 756 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 B3GAT3O94766 335 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 SOD2P04179 222 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 RPL9P32969 192 aaKnown RBP18.23■□□□□ 0.51
SYNE4-207ENST00000505054 CASP4P49662 377 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 CYP24A1Q07973 514 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 MYBPC2Q14324 1141 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 PTPN14Q15678 1187 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 NFIL3Q16649 462 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 BEST2Q8NFU1 509 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 B3GALT6Q96L58 329 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 MFSD1Q9H3U5 465 aa18.23■□□□□ 0.51
SYNE4-207ENST00000505054 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.23■□□□□ 0.51
SYNE4-207ENST00000505054 XPOTO43592 962 aaKnown RBP18.22■□□□□ 0.51
SYNE4-207ENST00000505054 MCM4P33991 863 aa18.22■□□□□ 0.51
SYNE4-207ENST00000505054 BRCC3P46736 316 aa18.22■□□□□ 0.51
SYNE4-207ENST00000505054 PMS1P54277 932 aaKnown RBP18.22■□□□□ 0.51
SYNE4-207ENST00000505054 PSMD6Q15008 389 aa18.22■□□□□ 0.51
SYNE4-207ENST00000505054 LMBRD2Q68DH5 695 aaPredicted RBP18.22■□□□□ 0.51
SYNE4-207ENST00000505054 CENPPQ6IPU0 288 aa18.22■□□□□ 0.51
SYNE4-207ENST00000505054 CCDC149Q6ZUS6 474 aa18.22■□□□□ 0.51
SYNE4-207ENST00000505054 NT5DC4Q86YG4 428 aa18.22■□□□□ 0.51
SYNE4-207ENST00000505054 TRIML1Q8N9V2 468 aa18.22■□□□□ 0.51
SYNE4-207ENST00000505054 PLEKHO2Q8TD55 490 aa18.22■□□□□ 0.51
SYNE4-207ENST00000505054 CHST7Q9NS84 486 aa18.22■□□□□ 0.51
SYNE4-207ENST00000505054 LIMD1Q9UGP4 676 aa18.22■□□□□ 0.51
SYNE4-207ENST00000505054 PRR23AA6NEV1 266 aa18.21■□□□□ 0.51
SYNE4-207ENST00000505054 SPDYE4A6NLX3 237 aa18.21■□□□□ 0.51
SYNE4-207ENST00000505054 PPP1R3GB7ZBB8 358 aa18.21■□□□□ 0.51
SYNE4-207ENST00000505054 I3L4J1 428 aa18.21■□□□□ 0.51
SYNE4-207ENST00000505054 LILRB3O75022 631 aa18.21■□□□□ 0.51
SYNE4-207ENST00000505054 NR2F2P24468 414 aa18.21■□□□□ 0.51
SYNE4-207ENST00000505054 CLCN5P51795 746 aa18.21■□□□□ 0.51
SYNE4-207ENST00000505054 TFAMQ00059 246 aaKnown RBP18.21■□□□□ 0.51
SYNE4-207ENST00000505054 EDRF1Q3B7T1 1238 aa18.21■□□□□ 0.51
SYNE4-207ENST00000505054 TMC5Q6UXY8 1006 aa18.21■□□□□ 0.51
SYNE4-207ENST00000505054 ASCL5Q7RTU5 278 aa18.21■□□□□ 0.51
SYNE4-207ENST00000505054 ACSF2Q96CM8 615 aaPredicted RBP18.21■□□□□ 0.51
SYNE4-207ENST00000505054 EMILIN2Q9BXX0 1053 aa18.21■□□□□ 0.51
SYNE4-207ENST00000505054 DPP3Q9NY33 737 aa18.21■□□□□ 0.51
SYNE4-207ENST00000505054 FAM186AA6NE01 2351 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 VPS13AQ96RL7 3174 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 ANO9A1A5B4 782 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 TRIM49BA6NDI0 452 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 TULP1O00294 542 aaPredicted RBP18.2■□□□□ 0.5
SYNE4-207ENST00000505054 MBD3O95983 291 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 URODP06132 367 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 GLUD2P49448 558 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 CLCN4P51793 760 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 DSG1Q02413 1049 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 ELAVL2Q12926 359 aaKnown RBP18.2■□□□□ 0.5
SYNE4-207ENST00000505054 USP41Q3LFD5 358 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 RTP2Q5QGT7 225 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 FAM171A1Q5VUB5 890 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 KIAA0319Q5VV43 1072 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 C9orf57Q5W0N0 161 aa18.2■□□□□ 0.5
SYNE4-207ENST00000505054 CWF19L1Q69YN2 538 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms