RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 LNX1Q8TBB1 728 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-220ENST00000505005 NOC3LQ8WTT2 800 aaKnown RBP10.63□□□□□ -0.71
NR1I3-220ENST00000505005 ACSF2Q96CM8 615 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-220ENST00000505005 MSLNLQ96KJ4 702 aa10.63□□□□□ -0.71
NR1I3-220ENST00000505005 MFSD14AQ96MC6 490 aa10.63□□□□□ -0.71
NR1I3-220ENST00000505005 CBWD1Q9BRT8 395 aa10.63□□□□□ -0.71
NR1I3-220ENST00000505005 HAPLN2Q9GZV7 340 aa10.63□□□□□ -0.71
NR1I3-220ENST00000505005 GOLPH3LQ9H4A5 285 aa10.63□□□□□ -0.71
NR1I3-220ENST00000505005 PCIF1Q9H4Z3 704 aa10.63□□□□□ -0.71
NR1I3-220ENST00000505005 INTS13Q9NVM9 706 aa10.63□□□□□ -0.71
NR1I3-220ENST00000505005 ZMYM5Q9UJ78 669 aa10.63□□□□□ -0.71
NR1I3-220ENST00000505005 USTQ9Y2C2 406 aa10.63□□□□□ -0.71
NR1I3-220ENST00000505005 PCDHA5Q9Y5H7 936 aa10.63□□□□□ -0.71
NR1I3-220ENST00000505005 C2CD2LO14523 706 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 PER2O15055 1255 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 PHACTR2O75167 634 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 PAPLNO95428 1278 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 FGF19O95750 216 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 STAU1O95793 577 aaKnown RBP10.62□□□□□ -0.71
NR1I3-220ENST00000505005 CYP11A1P05108 521 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 NR2F2P24468 414 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 PCSK1P29120 753 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 TUFMP49411 452 aaKnown RBP10.62□□□□□ -0.71
NR1I3-220ENST00000505005 PLCB2Q00722 1185 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 CYP24A1Q07973 514 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 MRPL58Q14197 206 aaKnown RBP10.62□□□□□ -0.71
NR1I3-220ENST00000505005 NFE2Q16621 373 aaPredicted RBP10.62□□□□□ -0.71
NR1I3-220ENST00000505005 CTXN3Q4LDR2 81 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 SEZ6Q53EL9 994 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 CENPPQ6IPU0 288 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 TMEM173Q86WV6 379 aaPredicted RBP10.62□□□□□ -0.71
NR1I3-220ENST00000505005 TOP6BLQ8N6T0 577 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 KIAA0895Q8NCT3 520 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 SLC22A17Q8WUG5 538 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 NXPE3Q969Y0 559 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 SAAL1Q96ER3 474 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 CEP295NLQ96MC4 621 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 CGRRF1Q99675 332 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 PHF7Q9BWX1 381 aaPredicted RBP10.62□□□□□ -0.71
NR1I3-220ENST00000505005 KCTD10Q9H3F6 313 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 PIDD1Q9HB75 910 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 DMAC2Q9NW81 257 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 GDAP2Q9NXN4 497 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 EHD2Q9NZN4 543 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 HCSTQ9UBK5 93 aa10.62□□□□□ -0.71
NR1I3-220ENST00000505005 MTCL1Q9Y4B5 1905 aaKnown RBP10.62□□□□□ -0.71
NR1I3-220ENST00000505005 CYB561D2O14569 222 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 CLIC2O15247 247 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 SLC16A3O15427 465 aaKnown RBP10.61□□□□□ -0.71
NR1I3-220ENST00000505005 MBTPS2O43462 519 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 KRT19P08727 400 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 BMP1P13497 986 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 ATF2P15336 505 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 CCNE1P24864 410 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 CYP2J2P51589 502 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 CLDN10P78369 228 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 TSPY1Q01534 308 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 SOX4Q06945 474 aaPredicted RBP10.61□□□□□ -0.71
NR1I3-220ENST00000505005 PNOCQ13519 176 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 GSE1Q14687 1217 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 SGSM1Q2NKQ1 1148 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 PPM1LQ5SGD2 360 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
NR1I3-220ENST00000505005 CEP135Q66GS9 1140 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 OVOS1Q6IE37 1185 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 IQCEQ6IPM2 695 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 LILRA6Q6PI73 481 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 OTOP3Q7RTS5 596 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 ADGRD2Q7Z7M1 963 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 ADHFE1Q8IWW8 467 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 GRAMD1CQ8IYS0 662 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 MLKLQ8NB16 471 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 KREMEN2Q8NCW0 462 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 C18orf25Q96B23 403 aaPredicted RBP10.61□□□□□ -0.71
NR1I3-220ENST00000505005 SENP8Q96LD8 212 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 CEP63Q96MT8 703 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.61□□□□□ -0.71
NR1I3-220ENST00000505005 KIAA1468Q9P260 1216 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 AFF4Q9UHB7 1163 aaKnown RBP10.61□□□□□ -0.71
NR1I3-220ENST00000505005 AGAP1Q9UPQ3 857 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 ASB3Q9Y575 518 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 CHD7Q9P2D1 2997 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 MYO7AQ13402 2215 aa10.61□□□□□ -0.71
NR1I3-220ENST00000505005 GOLGA8IPA6NC78 632 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 GOLGA8JA6NMD2 632 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 TULP1O00294 542 aaPredicted RBP10.6□□□□□ -0.71
NR1I3-220ENST00000505005 ZNF197O14709 1029 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 TGM5O43548 720 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 N4BP1O75113 896 aaKnown RBP10.6□□□□□ -0.71
NR1I3-220ENST00000505005 ZMYND10O75800 440 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 ABLIM3O94929 683 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 LRG1P02750 347 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 ITGB3P05106 788 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 NFICP08651 508 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 DLATP10515 647 aaKnown RBP10.6□□□□□ -0.71
NR1I3-220ENST00000505005 ALADP13716 330 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 CPB1P15086 417 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 OR1D2P34982 312 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 LTBRP36941 435 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 VAMP7P51809 220 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms