RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 KCNJ12Q14500 433 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 NR1I3Q14994 352 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 SURF1Q15526 300 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 MAN2A1Q16706 1144 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 DUOXA2Q1HG44 320 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 SOWAHAQ2M3V2 549 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 RTP2Q5QGT7 225 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 KIAA0319Q5VV43 1072 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 KRT39Q6A163 491 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 SPOPLQ6IQ16 392 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 PHLDB3Q6NSJ2 640 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 APBB1IPQ7Z5R6 666 aaPredicted RBP5.33□□□□□ -1.56
LMNB1-208ENST00000504788 HACE1Q8IYU2 909 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 LRRC52Q8N7C0 313 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 KLHL23Q8NBE8 558 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 OLIG1Q8TAK6 271 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 SPPL3Q8TCT6 385 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 NOC3LQ8WTT2 800 aaKnown RBP5.33□□□□□ -1.56
LMNB1-208ENST00000504788 SUSD3Q96L08 255 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 PKMYT1Q99640 499 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 TSG101Q99816 390 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 NAA15Q9BXJ9 866 aaKnown RBP5.33□□□□□ -1.56
LMNB1-208ENST00000504788 BCO2Q9BYV7 579 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 GPR88Q9GZN0 384 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 SDCBP2Q9H190 292 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 NKX2-4Q9H2Z4 354 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 NDST4Q9H3R1 872 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 TSPY26PQ9H489 355 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 SLC38A7Q9NVC3 462 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 ADAM28Q9UKQ2 775 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 ITGA11Q9UKX5 1188 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 LRFN2Q9ULH4 789 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 L1RE1Q9UN81 338 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 NUB1Q9Y5A7 615 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 C2orf16Q68DN1 1984 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 DENND4CQ5VZ89 1909 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 OBSL1O75147 1896 aa5.33□□□□□ -1.56
LMNB1-208ENST00000504788 TMEM265A0A087WTH1 108 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 I3L4J1 428 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 RNF225M0QZC1 329 aaPredicted RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 PODXLO00592 558 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 GRM6O15303 877 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 FGF18O76093 207 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 PAPLNO95428 1278 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 HLA-DRAP01903 254 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ALDH2P05091 517 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 EPB41P11171 864 aaKnown RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 LAG3P18627 525 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 TNNI1P19237 187 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 SLC9A1P19634 815 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ACO1P21399 889 aaKnown RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 PON1P27169 355 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 IRS1P35568 1242 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 MATR3P43243 847 aaKnown RBP eCLIP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 FXR1P51114 621 aaKnown RBP eCLIP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 NUBP1P53384 320 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 COPB1P53618 953 aaKnown RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 TFAMQ00059 246 aaKnown RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ADGRE1Q14246 886 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 HSP90AA2PQ14568 343 aaPredicted RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 COL19A1Q14993 1142 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 TMEM132AQ24JP5 1023 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 VWA3BQ502W6 1294 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 HABP4Q5JVS0 413 aaKnown RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 FUT10Q6P4F1 479 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 DCLRE1AQ6PJP8 1040 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 SARM1Q6SZW1 724 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 DDX53Q86TM3 631 aaKnown RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 GPR65Q8IYL9 337 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ABI1Q8IZP0 508 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 HS6ST3Q8IZP7 471 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 FIBCD1Q8N539 461 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 FBXL13Q8NEE6 735 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 LNX1Q8TBB1 728 aaPredicted RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 WHAMMQ8TF30 809 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 TATDN2Q93075 761 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 DDX27Q96GQ7 796 aaKnown RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 KREMEN1Q96MU8 473 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 UROC1Q96N76 676 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ERGIC2Q96RQ1 377 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 TGS1Q96RS0 853 aaKnown RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 RPS6KC1Q96S38 1066 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ARID3AQ99856 593 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 PI4K2AQ9BTU6 479 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 PLVAPQ9BX97 442 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ZBP1Q9H171 429 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 RAB20Q9NX57 234 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 CNTN6Q9UQ52 1028 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 LZTS1Q9Y250 596 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ZNF638Q14966 1978 aaKnown RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 LGALS16A8MUM7 142 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 BECN2A8MW95 431 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 KPNA7A9QM74 516 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 RFXAPO00287 272 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 HCRTO43612 131 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 B3GAT3O94766 335 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 OAZ2O95190 189 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 AFPP02771 609 aaKnown RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 SOD2P04179 222 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 RB1P06400 928 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms