RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 ZNF785A8K8V0 405 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 ISM1B1AKI9 464 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 FRS3O43559 492 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 SLC43A1O75387 559 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 MATN4O95460 622 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 ITGB1P05556 798 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 ZNF20P17024 532 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 PRIM2P49643 509 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 HABP2Q14520 560 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 C1orf228Q6PIY5 440 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 ZNF783Q6ZMS7 281 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 DOK3Q7L591 496 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 LIX1LQ8IVB5 337 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 KRT78Q8N1N4 520 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 MPP5Q8N3R9 675 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 CCDC33Q8N5R6 958 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 SLC17A8Q8NDX2 589 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 OR10H5Q8NGA6 315 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 ANKS1AQ92625 1134 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 EDAQ92838 391 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 PGBD4Q96DM1 585 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 WWC2-AS2Q96NR7 200 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 GPR20Q99678 358 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 IMPG2Q9BZV3 1241 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 PNPLA8Q9NP80 782 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 JKAMPQ9P055 326 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 SRRDQ9UH36 339 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 TAGLN3Q9UI15 199 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 JAG2Q9Y219 1238 aa6.06□□□□□ -1.44
TRAPPC13-205ENST00000504243 CAPN14A8MX76 684 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 MYO1CO00159 1063 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 TBX3O15119 743 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 MUSKO15146 869 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 AGFG2O95081 481 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 RARBP10826 455 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 SLC6A2P23975 617 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 MGAT1P26572 445 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 FMO1Q01740 532 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 PRKD1Q15139 912 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 ZNF365Q70YC5 407 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 EXOC8Q8IYI6 725 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 MRGPRX1Q96LB2 322 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 RIPOR3Q96MK2 946 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 REXO4Q9GZR2 422 aaKnown RBP6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 BTBD1Q9H0C5 482 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 HECAQ9UBI9 543 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 TSC22D4Q9Y3Q8 395 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 RIPOR2Q9Y4F9 1068 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 TESMINQ9Y4I5 508 aa6.05□□□□□ -1.44
TRAPPC13-205ENST00000504243 POM121BA6NF01 834 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 MYO1FO00160 1098 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 BTN3A1O00481 513 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 RPL17P18621 184 aaKnown RBP6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 ACO1P21399 889 aaKnown RBP6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 SERPINB3P29508 390 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 SLC6A4P31645 630 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 STT3AP46977 705 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 ALDH5A1P51649 535 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 ZNF135P52742 658 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 CHN2P52757 468 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 MXRA7P84157 204 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 SLC13A2Q13183 592 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 MORC3Q14149 939 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 KIF22Q14807 665 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 SLC44A4Q53GD3 710 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 C3orf38Q5JPI3 329 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 MAMDC4Q6UXC1 1216 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 SPICE1Q8N0Z3 855 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 ANKRD35Q8N283 1001 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 KBTBD7Q8WVZ9 684 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 MIEF2Q96C03 454 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 SLC39A13Q96H72 371 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 ADOQ96SZ5 270 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 ARPC5LQ9BPX5 153 aa6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 CPEB1Q9BZB8 566 aaKnown RBP6.04□□□□□ -1.44
TRAPPC13-205ENST00000504243 DRGXA6NNA5 263 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 C1QTNF3-AMACRE9PGA6 284 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 M0QYG6 137 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 FOXN3O00409 490 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 CYP27B1O15528 508 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 UNC5CO95185 931 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 EN2P19622 333 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 TNFSF4P23510 183 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 HTR3AP46098 478 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 VPS72Q15906 364 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 XRRA1Q6P2D8 792 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 Q6ZSN1 163 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 USP37Q86T82 979 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 DPP9Q86TI2 863 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 SESTD1Q86VW0 696 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 MDGA1Q8NFP4 955 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 TRIM54Q9BYV2 358 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 SIK2Q9H0K1 926 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 RLIMQ9NVW2 624 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 FNIP2Q9P278 1114 aa6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 AFF4Q9UHB7 1163 aaKnown RBP6.03□□□□□ -1.44
TRAPPC13-205ENST00000504243 PLEKHD1A6NEE1 506 aa6.02□□□□□ -1.45
TRAPPC13-205ENST00000504243 RASA4BC9J798 803 aa6.02□□□□□ -1.45
TRAPPC13-205ENST00000504243 RASA4O43374 803 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms