RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SMIM35A0A1B0GVV1 85 aa22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 CD58P19256 250 aa22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 CTNNA1P35221 906 aaKnown RBP22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 ADAM17P78536 824 aa22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 MFSD10Q14728 455 aa22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 CLUL1Q15846 466 aa22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 KIZQ2M2Z5 673 aa22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 CPNE8Q86YQ8 564 aa22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 PASD1Q8IV76 773 aa22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 BCO2Q9BYV7 579 aa22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 PCDHA3Q9Y5H8 950 aa22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 BHMG1C9JSJ3 638 aaPredicted RBP22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 SART1O43290 800 aaKnown RBP22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 WEE2P0C1S8 567 aa22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 ZNF211Q13398 564 aaPredicted RBP22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 NAP1L3Q99457 506 aaPredicted RBP22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 VRTNQ9H8Y1 702 aa22.76■■□□□ 1.23
UBE2D3-216ENST00000503742 CCDC66A2RUB6 948 aa22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 CPT1AP50416 773 aa22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 C1QBPQ07021 282 aaKnown RBP22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 HIC1Q14526 733 aa22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 ADPGKQ9BRR6 497 aa22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 FAM49AQ9H0Q0 323 aaPredicted RBP22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 DDX47Q9H0S4 455 aaKnown RBP22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 SLITRK6Q9H5Y7 841 aa22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 EPB41L5Q9HCM4 733 aa22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 ADAM22Q9P0K1 906 aa22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 ANAPC7Q9UJX3 599 aa22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 POLIQ9UNA4 740 aa22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 CITO14578 2027 aa22.75■■□□□ 1.23
UBE2D3-216ENST00000503742 ZSCAN5CA6NGD5 496 aaPredicted RBP22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 SPOPO43791 374 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 KRT19P08727 400 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 FGFR4P22455 802 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 HOXA11P31270 313 aaPredicted RBP22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 SSTR3P32745 418 aaPredicted RBP22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 GRM5P41594 1212 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 PSEN2P49810 448 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 EPHB4P54760 987 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 YWHAEP62258 255 aaKnown RBP22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 GUCY2DQ02846 1103 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 ZNF667Q5HYK9 610 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 LIN9Q5TKA1 542 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 SCARA5Q6ZMJ2 495 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 ACAP3Q96P50 834 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 C11orf70Q9BRQ4 267 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 GCOM2Q9BZD3 368 aaPredicted RBP22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 ST7Q9NRC1 585 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 C2CD2Q9Y426 696 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 NR2E1Q9Y466 385 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 ITGB3P05106 788 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 ATICP31939 592 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 CRHR2Q13324 411 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 C2CD6Q53TS8 623 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 PLEKHA7Q6IQ23 1121 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 LLGL2Q6P1M3 1020 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 TMEM130Q8N3G9 435 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 TRIM7Q9C029 511 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 CDHR5Q9HBB8 845 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 TLL2Q9Y6L7 1015 aa22.74■■□□□ 1.23
UBE2D3-216ENST00000503742 TNPO2O14787 897 aaKnown RBP22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 LSM8O95777 96 aaKnown RBP22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 CYP2C9P11712 490 aa22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 BRD2P25440 801 aaKnown RBP22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 TNNT3P45378 269 aaPredicted RBP22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 CARSP49589 748 aaKnown RBP22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 TMEM62Q0P6H9 643 aa22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 TMEM132DQ14C87 1099 aa22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 DCAF4L1Q3SXM0 396 aa22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 AADACL2Q6P093 401 aa22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 EMBQ6PCB8 327 aa22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 RUFY4Q6ZNE9 571 aa22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 NT5DC4Q86YG4 428 aa22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 PPP1R13LQ8WUF5 828 aa22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 CASKIN2Q8WXE0 1202 aa22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 NXF1Q9UBU9 619 aaKnown RBP22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 HPCAL4Q9UM19 191 aa22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 PCDHGC3Q9UN70 934 aa22.73■■□□□ 1.23
UBE2D3-216ENST00000503742 MMP8P22894 467 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 CTGFP29279 349 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 CDH5P33151 784 aaPredicted RBP22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 SREBF2Q12772 1141 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 MAMLD1Q13495 774 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 PCBP1Q15365 356 aaKnown RBP eCLIP22.72■■□□□ 1.239e-7■□□□□ 10.8
UBE2D3-216ENST00000503742 WDR72Q3MJ13 1102 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 ZNF394Q53GI3 561 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 MMS22LQ6ZRQ5 1243 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 TFAP2BQ92481 460 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 CAVIN3Q969G5 261 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 AP5M1Q9H0R1 490 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 SLC1A1P43005 524 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 PPP2R5EQ16537 467 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 PHLDB2Q86SQ0 1253 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 CD302Q8IX05 232 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 GDAP1L1Q96MZ0 367 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 SDCBP2Q9H190 292 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 PLEKHA4Q9H4M7 779 aa22.72■■□□□ 1.23
UBE2D3-216ENST00000503742 RALGAPA2Q2PPJ7 1873 aa22.71■■□□□ 1.23
UBE2D3-216ENST00000503742 A0A0U1RQG5 324 aaPredicted RBP22.71■■□□□ 1.23
UBE2D3-216ENST00000503742 ESYT3A0FGR9 886 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms