RNA–Protein interactions for RNA: ENST00000503638.1

PGGT1B-204, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

TSL 3

Gene PGGT1B, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-204ENST00000503638 LMAN2LQ9H0V9 348 aa14.44□□□□□ -0.1
PGGT1B-204ENST00000503638 METTL14Q9HCE5 456 aaKnown RBP14.44□□□□□ -0.1
PGGT1B-204ENST00000503638 STK39Q9UEW8 545 aa14.44□□□□□ -0.1
PGGT1B-204ENST00000503638 COL4A4P53420 1690 aaPredicted RBP14.44□□□□□ -0.1
PGGT1B-204ENST00000503638 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 PES1O00541 588 aaKnown RBP14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 ATMINO43313 823 aaPredicted RBP14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 CXCL14O95715 111 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 DNAJB1P25685 340 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 PNPLA4P41247 253 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 MTIF2P46199 727 aaKnown RBP14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 GLUD2P49448 558 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 TAF6P49848 677 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 SMC1AQ14683 1233 aaKnown RBP14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 GSE1Q14687 1217 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 USP41Q3LFD5 358 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 SV2CQ496J9 727 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 CT47A1Q5JQC4 288 aaPredicted RBP14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 CCDC150Q8NCX0 1101 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 AUTS2Q8WXX7 1259 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 RIN2Q8WYP3 895 aaPredicted RBP14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 MRPL38Q96DV4 380 aaKnown RBP14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 CNOT6LQ96LI5 555 aaKnown RBP14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 GPR62Q9BZJ7 368 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 MRPL17Q9NRX2 175 aaKnown RBP14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 LZTS1Q9Y250 596 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 NFE2L3Q9Y4A8 694 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 PCDHGC5Q9Y5F6 944 aa14.43□□□□□ -0.1
PGGT1B-204ENST00000503638 ANK1P16157 1881 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 PDCD11Q14690 1871 aaKnown RBP14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 TMEM189-UBE2V1I3L0A0 370 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 SOD2P04179 222 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 IGFBP6P24592 240 aaPredicted RBP14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 KCNQ1P51787 676 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 ERVFC1P60507 584 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 MYL5Q02045 173 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 SKIV2LQ15477 1246 aaKnown RBP14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 TIGD5Q53EQ6 642 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 FOXR2Q6PJQ5 311 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 EP400NLQ6ZTU2 488 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 TAS1R1Q7RTX1 841 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 FRMD5Q7Z6J6 570 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 RBM23Q86U06 439 aaKnown RBP14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 ZC3H3Q8IXZ2 948 aaKnown RBP14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 AOPEPQ8N6M6 819 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 PPP2R3CQ969Q6 453 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 HPDLQ96IR7 371 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 TTPALQ9BTX7 342 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 HERC2P3Q9BVR0 1158 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 VN1R3Q9BXE9 311 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 IMPG2Q9BZV3 1241 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 THAP9Q9H5L6 903 aa14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.42□□□□□ -0.1
PGGT1B-204ENST00000503638 TRANK1O15050 2925 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 ARHGEF37A1IGU5 675 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 BECN2A8MW95 431 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 PIRO00625 290 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 IKBKBO14920 756 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 ODC1P11926 461 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 TKTP29401 623 aaKnown RBP14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 IRS1P35568 1242 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 MXI1P50539 228 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 LILRA4P59901 499 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 TNNC1P63316 161 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 NCOA4Q13772 614 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 ZNF699Q32M78 642 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 TDRD10Q5VZ19 366 aaKnown RBP14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 SV2AQ7L0J3 742 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 METTL23Q86XA0 190 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 GLYCTKQ8IVS8 523 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 LRRC52Q8N7C0 313 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 APPL2Q8NEU8 664 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 ANKRD20A12PQ8NF67 263 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 ZNF516Q92618 1163 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 MMS19Q96T76 1030 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 ZBP1Q9H171 429 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 IGFLR1Q9H665 355 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 NGRNQ9NPE2 291 aaKnown RBP14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 SIX4Q9UIU6 781 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 SSX2IPQ9Y2D8 614 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 TIMM13Q9Y5L4 95 aaPredicted RBP14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 MTCH2Q9Y6C9 303 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 PLXNA4Q9HCM2 1894 aa14.41□□□□□ -0.1
PGGT1B-204ENST00000503638 ANO9A1A5B4 782 aa14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 KPNA7A9QM74 516 aa14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 KCNJ18B7U540 433 aa14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 CYB561D2O14569 222 aa14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 SPTLC1O15269 473 aa14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 HUS1O60921 280 aa14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 TPM2P07951 284 aa14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 CTSAP10619 480 aa14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 PRKCSHP14314 528 aaPredicted RBP14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 CDK11BP21127 795 aaKnown RBP14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 GTF2H1P32780 548 aa14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 ZNF165P49910 485 aa14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 MYL6P60660 151 aa14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 MYL7Q01449 175 aa14.4□□□□□ -0.1
PGGT1B-204ENST00000503638 PPP3CAQ08209 521 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms