RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 BIRC3Q13489 604 aa17.78■□□□□ 0.44
SCLT1-205ENST00000503401 NFKBIBQ15653 356 aa17.78■□□□□ 0.44
SCLT1-205ENST00000503401 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.78■□□□□ 0.44
SCLT1-205ENST00000503401 SYAP1Q96A49 352 aaPredicted RBP17.78■□□□□ 0.44
SCLT1-205ENST00000503401 ELMO3Q96BJ8 720 aa17.78■□□□□ 0.44
SCLT1-205ENST00000503401 CEP63Q96MT8 703 aa17.78■□□□□ 0.44
SCLT1-205ENST00000503401 IRAK3Q9Y616 596 aa17.78■□□□□ 0.44
SCLT1-205ENST00000503401 TSC2P49815 1807 aa17.78■□□□□ 0.44
SCLT1-205ENST00000503401 PLXNA3P51805 1871 aa17.77■□□□□ 0.44
SCLT1-205ENST00000503401 C4BPAP04003 597 aaKnown RBP17.77■□□□□ 0.44
SCLT1-205ENST00000503401 GCLMP48507 274 aa17.77■□□□□ 0.44
SCLT1-205ENST00000503401 PPP3CAQ08209 521 aa17.77■□□□□ 0.44
SCLT1-205ENST00000503401 DCAF17Q5H9S7 520 aaPredicted RBP17.77■□□□□ 0.44
SCLT1-205ENST00000503401 FOXR2Q6PJQ5 311 aa17.77■□□□□ 0.44
SCLT1-205ENST00000503401 C11orf57Q6ZUT1 292 aaPredicted RBP17.77■□□□□ 0.44
SCLT1-205ENST00000503401 LNX1Q8TBB1 728 aaPredicted RBP17.77■□□□□ 0.44
SCLT1-205ENST00000503401 SENP8Q96LD8 212 aa17.77■□□□□ 0.44
SCLT1-205ENST00000503401 ZNF560Q96MR9 790 aa17.77■□□□□ 0.44
SCLT1-205ENST00000503401 DACH1Q9UI36 760 aa17.77■□□□□ 0.44
SCLT1-205ENST00000503401 R3HCC1Q9Y3T6 440 aaKnown RBP17.77■□□□□ 0.44
SCLT1-205ENST00000503401 KPNA7A9QM74 516 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 M0QZQ0 153 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 TEX28O15482 410 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 LINC01565O15544 149 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 PHACTR2O75167 634 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 PSMD5Q16401 504 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 DUSP6Q16828 381 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 CCDC40Q4G0X9 1142 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 VARS2Q5ST30 1063 aaKnown RBP17.76■□□□□ 0.43
SCLT1-205ENST00000503401 TCERG1LQ5VWI1 586 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 EP400NLQ6ZTU2 488 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 SV2AQ7L0J3 742 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 FILIP1Q7Z7B0 1213 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 USP37Q86T82 979 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 PPP2R3CQ969Q6 453 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 HPDLQ96IR7 371 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 PRDM6Q9NQX0 595 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 ARMCX3Q9UH62 379 aaPredicted RBP17.76■□□□□ 0.43
SCLT1-205ENST00000503401 PCDHB8Q9UN66 801 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 A0A0C4DFX4 3053 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 IKBKBO14920 756 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 SYN3O14994 580 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 CLASP2O75122 1294 aaKnown RBP17.76■□□□□ 0.43
SCLT1-205ENST00000503401 VNN1O95497 513 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 PNPLA4P41247 253 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 TYRO3Q06418 890 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 TRPC3Q13507 836 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 STX1AQ16623 288 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 SV2CQ496J9 727 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 LLGL2Q6P1M3 1020 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 RSPO2Q6UXX9 243 aaPredicted RBP17.76■□□□□ 0.43
SCLT1-205ENST00000503401 CREBRFQ8IUR6 639 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 LRRC52Q8N7C0 313 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 PIK3R5Q8WYR1 880 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 KLHL5Q96PQ7 755 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 EMILIN2Q9BXX0 1053 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.76■□□□□ 0.432e-6■■■■■ 94.8
SCLT1-205ENST00000503401 ANO10Q9NW15 660 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 VCANP13611 3396 aa17.76■□□□□ 0.43
SCLT1-205ENST00000503401 SYCE3A1L190 88 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 CYB561D2O14569 222 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 ADAM12O43184 909 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 KLRC2P26717 231 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 ERCC5P28715 1186 aaPredicted RBP17.75■□□□□ 0.43
SCLT1-205ENST00000503401 AP3M2P53677 418 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 MYL6P60660 151 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 NCOA4Q13772 614 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 ZACNQ401N2 412 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 HSP90AA4PQ58FG1 418 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 VN1R2Q8NFZ6 395 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 DNAJC25Q9H1X3 360 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 RXFP1Q9HBX9 757 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 CLDND1Q9NY35 253 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 SSX2IPQ9Y2D8 614 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 SNX9Q9Y5X1 595 aa17.75■□□□□ 0.43
SCLT1-205ENST00000503401 CLSTN1O94985 981 aa17.74■□□□□ 0.43
SCLT1-205ENST00000503401 ODC1P11926 461 aa17.74■□□□□ 0.43
SCLT1-205ENST00000503401 TPD52L1Q16890 204 aaPredicted RBP17.74■□□□□ 0.43
SCLT1-205ENST00000503401 C15orf39Q6ZRI6 1047 aa17.74■□□□□ 0.43
SCLT1-205ENST00000503401 FRMD5Q7Z6J6 570 aa17.74■□□□□ 0.43
SCLT1-205ENST00000503401 PALB2Q86YC2 1186 aa17.74■□□□□ 0.43
SCLT1-205ENST00000503401 APPL2Q8NEU8 664 aa17.74■□□□□ 0.43
SCLT1-205ENST00000503401 CLSTN3Q9BQT9 956 aa17.74■□□□□ 0.43
SCLT1-205ENST00000503401 LRRN2O75325 713 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 GLP2RO95838 553 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 YWHAHQ04917 246 aaPredicted RBP17.73■□□□□ 0.43
SCLT1-205ENST00000503401 DLX2Q07687 328 aaPredicted RBP17.73■□□□□ 0.43
SCLT1-205ENST00000503401 MYO1EQ12965 1108 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 SKOR2Q2VWA4 1001 aaPredicted RBP17.73■□□□□ 0.43
SCLT1-205ENST00000503401 CBWD6Q4V339 395 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 CBWD3Q5JTY5 395 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 CBWD5Q5RIA9 395 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 WSCD1Q658N2 575 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 ANKS3Q6ZW76 656 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 IRF2BP1Q8IU81 584 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 TAS1R2Q8TE23 839 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 SLC35C1Q96A29 364 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 XYLT2Q9H1B5 865 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 METTL14Q9HCE5 456 aaKnown RBP17.73■□□□□ 0.43
SCLT1-205ENST00000503401 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms