RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 NCOA4Q13772 614 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 EFCAB12Q6NXP0 572 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 WDR49Q8IV35 697 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 FAM71BQ8TC56 605 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 ALG3Q92685 438 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 RNPC3Q96LT9 517 aaKnown RBP12.35□□□□□ -0.43
USP46-204ENST00000503060 DDX47Q9H0S4 455 aaKnown RBP12.35□□□□□ -0.43
USP46-204ENST00000503060 PIF1Q9H611 641 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 ERAP1Q9NZ08 941 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 ACKR2O00590 384 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 SART1O43290 800 aaKnown RBP12.34□□□□□ -0.43
USP46-204ENST00000503060 GH1P01241 217 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 GJB1P08034 283 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 UNGP13051 313 aaPredicted RBP12.34□□□□□ -0.43
USP46-204ENST00000503060 COMTP21964 271 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 TBXAS1P24557 533 aaPredicted RBP12.34□□□□□ -0.43
USP46-204ENST00000503060 GCLCP48506 637 aaPredicted RBP12.34□□□□□ -0.43
USP46-204ENST00000503060 CLCN3P51790 818 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 NOP14P78316 857 aaKnown RBP12.34□□□□□ -0.43
USP46-204ENST00000503060 ZNF484Q5JVG2 852 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 LCA5Q86VQ0 697 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 UBL4BQ8N7F7 174 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 IFT81Q8WYA0 676 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 NLRP4Q96MN2 994 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 ZSWIM1Q9BR11 485 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 FZD8Q9H461 694 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 RNPEPQ9H4A4 650 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 SLITRK6Q9H5Y7 841 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 MORF4L1Q9UBU8 362 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 CNOT8Q9UFF9 292 aaKnown RBP12.34□□□□□ -0.43
USP46-204ENST00000503060 CPSF3Q9UKF6 684 aaKnown RBP12.34□□□□□ -0.43
USP46-204ENST00000503060 NFU1Q9UMS0 254 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 PCDHB4Q9Y5E5 795 aa12.34□□□□□ -0.43
USP46-204ENST00000503060 PLXNB2O15031 1838 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 ASAP2O43150 1006 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 C22orf31O95567 290 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 LGALS2P05162 132 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 PROZP22891 400 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 INHBEP58166 350 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 PTENP60484 403 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 POU5F1BQ06416 359 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 ZNF211Q13398 564 aaPredicted RBP12.33□□□□□ -0.43
USP46-204ENST00000503060 SURF1Q15526 300 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.43
USP46-204ENST00000503060 UMODL1Q5DID0 1318 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 MAMDC4Q6UXC1 1216 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 ABRAQ8N0Z2 381 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 KRT35Q92764 455 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 ZBTB10Q96DT7 871 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 ZNF668Q96K58 619 aaPredicted RBP12.33□□□□□ -0.43
USP46-204ENST00000503060 NAP1L3Q99457 506 aaPredicted RBP12.33□□□□□ -0.43
USP46-204ENST00000503060 CNTN6Q9UQ52 1028 aa12.33□□□□□ -0.43
USP46-204ENST00000503060 PLXNA1Q9UIW2 1896 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 BHMG1C9JSJ3 638 aaPredicted RBP12.33□□□□□ -0.44
USP46-204ENST00000503060 INO80B-WBP1J3KQ70 363 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 STRNO43815 780 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 INSRRP14616 1297 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 MARCKSL1P49006 195 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 CLUL1Q15846 466 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 MPZL3Q6UWV2 235 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 ZNF467Q7Z7K2 595 aaPredicted RBP12.33□□□□□ -0.44
USP46-204ENST00000503060 MCOLN2Q8IZK6 566 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 CD101Q93033 1021 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 BTBD6Q96KE9 485 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 SLX1AQ9BQ83 275 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 IMPG2Q9BZV3 1241 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 WNT8AQ9H1J5 351 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 PTPRHQ9HD43 1115 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 CASS4Q9NQ75 786 aa12.33□□□□□ -0.44
USP46-204ENST00000503060 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.33□□□□□ -0.44
USP46-204ENST00000503060 ECEL1O95672 775 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 SYF2O95926 243 aaKnown RBP12.32□□□□□ -0.44
USP46-204ENST00000503060 CYP1A1P04798 512 aaPredicted RBP12.32□□□□□ -0.44
USP46-204ENST00000503060 PEX5P50542 639 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 MBTD1Q05BQ5 628 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 TRADDQ15628 312 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 ATF7IP2Q5U623 682 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 EEF1DP3Q658K8 133 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 SCARA3Q6AZY7 606 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 TMEM270Q6UE05 265 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 RBBP8NLQ8NC74 664 aaPredicted RBP12.32□□□□□ -0.44
USP46-204ENST00000503060 KATNBL1Q9H079 304 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 AVENQ9NQS1 362 aaPredicted RBP12.32□□□□□ -0.44
USP46-204ENST00000503060 VPS18Q9P253 973 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 AGPSO00116 658 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 PPFIA2O75334 1257 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 ASS1P00966 412 aaKnown RBP12.32□□□□□ -0.44
USP46-204ENST00000503060 CST3P01034 146 aaPredicted RBP12.32□□□□□ -0.44
USP46-204ENST00000503060 MYBL1P10243 752 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 CTNNA2P26232 953 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 FKBP1BP68106 108 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 PTK7Q13308 1070 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 ZNF568Q3ZCX4 644 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 NAA35Q5VZE5 725 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 TRIM72Q6ZMU5 477 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 CPNE8Q86YQ8 564 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 UBR7Q8N806 425 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 KIAA1958Q8N8K9 716 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 EIF1ADQ8N9N8 165 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms