RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 GKAP1Q5VSY0 366 aaPredicted RBP17.6■□□□□ 0.41
VCAN-204ENST00000502527 TAOK1Q7L7X3 1001 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 WDR49Q8IV35 697 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 FEZF2Q8TBJ5 459 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 PRPF31Q8WWY3 499 aaKnown RBP17.6■□□□□ 0.41
VCAN-204ENST00000502527 SEPT1Q8WYJ6 367 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 FAM167AQ96KS9 214 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 SCLT1Q96NL6 688 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 HEMGNQ9BXL5 484 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 MRPL4Q9BYD3 311 aaKnown RBP17.6■□□□□ 0.41
VCAN-204ENST00000502527 OSBPL8Q9BZF1 889 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 ADAM7Q9H2U9 754 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 CDC42EP4Q9H3Q1 356 aaKnown RBP17.6■□□□□ 0.41
VCAN-204ENST00000502527 AAASQ9NRG9 546 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 IP6K2Q9UHH9 426 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 R3HDM2Q9Y2K5 976 aaKnown RBP17.6■□□□□ 0.41
VCAN-204ENST00000502527 USP2O75604 605 aaPredicted RBP17.6■□□□□ 0.41
VCAN-204ENST00000502527 TOM1L1O75674 476 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 FSBPO95073 299 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 SSR1P43307 286 aaKnown RBP17.6■□□□□ 0.41
VCAN-204ENST00000502527 SLCO1A2P46721 670 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 TAS2R40P59535 323 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 DRP2Q13474 957 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 QPCTQ16769 361 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 SEZ6Q53EL9 994 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 TREML2Q5T2D2 321 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 CACNA2D3Q8IZS8 1091 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 BBOF1Q8ND07 529 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 ZNF606Q8WXB4 792 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 BBXQ8WY36 941 aaPredicted RBP17.6■□□□□ 0.41
VCAN-204ENST00000502527 SEC16BQ96JE7 1060 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 TCHPQ9BT92 498 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 TRAIPQ9BWF2 469 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 BTBD7Q9P203 1132 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 ANAPC5Q9UJX4 755 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 LOC285556D6RIA3 1793 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 SOWAHBA6NEL2 793 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 ASS1P00966 412 aaKnown RBP17.59■□□□□ 0.41
VCAN-204ENST00000502527 DRD4P21917 467 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 MMP8P22894 467 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 SSTR3P32745 418 aaPredicted RBP17.59■□□□□ 0.41
VCAN-204ENST00000502527 TCF7P36402 384 aaPredicted RBP17.59■□□□□ 0.41
VCAN-204ENST00000502527 ITGA8P53708 1063 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 DAB2IPQ5VWQ8 1189 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 IER5Q5VY09 327 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 METTL7BQ6UX53 244 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 ZNF365Q70YC5 407 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 UBR7Q8N806 425 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 CABS1Q96KC9 395 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 USTQ9Y2C2 406 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 CD2APQ9Y5K6 639 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 SIP14410 1827 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 LCTP09848 1927 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 LSM8O95777 96 aaKnown RBP17.59■□□□□ 0.41
VCAN-204ENST00000502527 CALB1P05937 261 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 MKRN4PQ13434 485 aaPredicted RBP17.59■□□□□ 0.41
VCAN-204ENST00000502527 TRIP13Q15645 432 aaPredicted RBP17.59■□□□□ 0.41
VCAN-204ENST00000502527 CCDC121Q6ZUS5 278 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 CCDC89Q8N998 374 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 ATXN2LQ8WWM7 1075 aaKnown RBP17.59■□□□□ 0.41
VCAN-204ENST00000502527 TCP11Q8WWU5 503 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 SERPINB12Q96P63 405 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 DDX23Q9BUQ8 820 aaKnown RBP17.59■□□□□ 0.41
VCAN-204ENST00000502527 INTS9Q9NV88 658 aaKnown RBP17.59■□□□□ 0.41
VCAN-204ENST00000502527 SNCAIPQ9Y6H5 919 aa17.59■□□□□ 0.41
VCAN-204ENST00000502527 O00370 1275 aa17.58■□□□□ 0.4
VCAN-204ENST00000502527 MSCO60682 206 aa17.58■□□□□ 0.4
VCAN-204ENST00000502527 ACSL3O95573 720 aa17.58■□□□□ 0.4
VCAN-204ENST00000502527 TTC4O95801 387 aa17.58■□□□□ 0.4
VCAN-204ENST00000502527 CHKAP35790 457 aa17.58■□□□□ 0.4
VCAN-204ENST00000502527 VGLL4Q14135 290 aa17.58■□□□□ 0.4
VCAN-204ENST00000502527 SURF1Q15526 300 aa17.58■□□□□ 0.4
VCAN-204ENST00000502527 ZBTB33Q86T24 672 aa17.58■□□□□ 0.4
VCAN-204ENST00000502527 NCAPG2Q86XI2 1143 aa17.58■□□□□ 0.4
VCAN-204ENST00000502527 EXOC8Q8IYI6 725 aa17.58■□□□□ 0.4
VCAN-204ENST00000502527 SPATC1LQ9H0A9 340 aa17.58■□□□□ 0.4
VCAN-204ENST00000502527 NEU2Q9Y3R4 380 aa17.58■□□□□ 0.4
VCAN-204ENST00000502527 OGTO15294 1046 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 GAS2O43903 313 aaKnown RBP17.57■□□□□ 0.4
VCAN-204ENST00000502527 FAM189A1O60320 539 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 CST3P01034 146 aaPredicted RBP17.57■□□□□ 0.4
VCAN-204ENST00000502527 ATP5DP30049 168 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 TNFSF9P41273 254 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 HIRAP54198 1017 aaPredicted RBP17.57■□□□□ 0.4
VCAN-204ENST00000502527 LMNB2Q03252 620 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 MXD4Q14582 209 aaPredicted RBP17.57■□□□□ 0.4
VCAN-204ENST00000502527 DUOXA2Q1HG44 320 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 SGSM1Q2NKQ1 1148 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 CDCA2Q69YH5 1023 aaPredicted RBP17.57■□□□□ 0.4
VCAN-204ENST00000502527 ZBTB8OSQ8IWT0 167 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 RCOR2Q8IZ40 523 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 RBM41Q96IZ5 413 aaKnown RBP17.57■□□□□ 0.4
VCAN-204ENST00000502527 ZNF317Q96PQ6 595 aaPredicted RBP17.57■□□□□ 0.4
VCAN-204ENST00000502527 CCDC113Q9H0I3 377 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 CAPN7Q9Y6W3 813 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 TMEM191CA6NGB0 347 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 TTLL13PA6NNM8 815 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 PEX10O60683 326 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 TMEM191BP0C7N4 346 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 CD58P19256 250 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms