RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 NRIP1P48552 1158 aa16.78■□□□□ 0.28
CPNE1-228ENST00000498814 CREMQ03060 361 aa16.78■□□□□ 0.28
CPNE1-228ENST00000498814 BFSP1Q12934 665 aa16.78■□□□□ 0.28
CPNE1-228ENST00000498814 DUSP6Q16828 381 aa16.78■□□□□ 0.28
CPNE1-228ENST00000498814 SV2CQ496J9 727 aa16.78■□□□□ 0.28
CPNE1-228ENST00000498814 CT47A1Q5JQC4 288 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-228ENST00000498814 C1orf220Q5T0J3 134 aa16.78■□□□□ 0.28
CPNE1-228ENST00000498814 RBM23Q86U06 439 aaKnown RBP16.78■□□□□ 0.28
CPNE1-228ENST00000498814 EFHBQ8N7U6 833 aa16.78■□□□□ 0.28
CPNE1-228ENST00000498814 APPL2Q8NEU8 664 aa16.78■□□□□ 0.28
CPNE1-228ENST00000498814 LNX1Q8TBB1 728 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-228ENST00000498814 KLHL5Q96PQ7 755 aa16.78■□□□□ 0.28
CPNE1-228ENST00000498814 FNIP2Q9P278 1114 aa16.78■□□□□ 0.28
CPNE1-228ENST00000498814 R3HCC1Q9Y3T6 440 aaKnown RBP16.78■□□□□ 0.28
CPNE1-228ENST00000498814 MTCL1Q9Y4B5 1905 aaKnown RBP16.78■□□□□ 0.28
CPNE1-228ENST00000498814 TSC2P49815 1807 aa16.77■□□□□ 0.28
CPNE1-228ENST00000498814 ARHGEF37A1IGU5 675 aa16.77■□□□□ 0.28
CPNE1-228ENST00000498814 KPNA7A9QM74 516 aa16.77■□□□□ 0.28
CPNE1-228ENST00000498814 PER2O15055 1255 aa16.77■□□□□ 0.28
CPNE1-228ENST00000498814 CLASP2O75122 1294 aaKnown RBP16.77■□□□□ 0.28
CPNE1-228ENST00000498814 C4BPAP04003 597 aaKnown RBP16.77■□□□□ 0.28
CPNE1-228ENST00000498814 KRT19P08727 400 aa16.77■□□□□ 0.28
CPNE1-228ENST00000498814 ERCC5P28715 1186 aaPredicted RBP16.77■□□□□ 0.28
CPNE1-228ENST00000498814 GTF2F1P35269 517 aaKnown RBP eCLIP16.77■□□□□ 0.28
CPNE1-228ENST00000498814 SCARA3Q6AZY7 606 aa16.77■□□□□ 0.28
CPNE1-228ENST00000498814 SASS6Q6UVJ0 657 aa16.77■□□□□ 0.28
CPNE1-228ENST00000498814 PRSS55Q6UWB4 352 aaPredicted RBP16.77■□□□□ 0.28
CPNE1-228ENST00000498814 DSTYKQ6XUX3 929 aa16.77■□□□□ 0.28
CPNE1-228ENST00000498814 ANKS3Q6ZW76 656 aa16.77■□□□□ 0.28
CPNE1-228ENST00000498814 SENP8Q96LD8 212 aa16.77■□□□□ 0.28
CPNE1-228ENST00000498814 MED15Q96RN5 788 aa16.77■□□□□ 0.28
CPNE1-228ENST00000498814 PLXNA3P51805 1871 aa16.77■□□□□ 0.27
CPNE1-228ENST00000498814 TEX28O15482 410 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 FGFR1OPO95684 399 aaKnown RBP16.76■□□□□ 0.27
CPNE1-228ENST00000498814 C1RP00736 705 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 CST3P01034 146 aaPredicted RBP16.76■□□□□ 0.27
CPNE1-228ENST00000498814 TYMPP19971 482 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 GTF2H1P32780 548 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 MYO1EQ12965 1108 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 ADAM15Q13444 863 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 KCNC3Q14003 757 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 MRPL58Q14197 206 aaKnown RBP16.76■□□□□ 0.27
CPNE1-228ENST00000498814 PSMD5Q16401 504 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 CTC1Q2NKJ3 1217 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 SKOR2Q2VWA4 1001 aaPredicted RBP16.76■□□□□ 0.27
CPNE1-228ENST00000498814 VARS2Q5ST30 1063 aaKnown RBP16.76■□□□□ 0.27
CPNE1-228ENST00000498814 TDRD10Q5VZ19 366 aaKnown RBP16.76■□□□□ 0.27
CPNE1-228ENST00000498814 CAVIN1Q6NZI2 390 aaKnown RBP16.76■□□□□ 0.27
CPNE1-228ENST00000498814 FRMD5Q7Z6J6 570 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 PPFIBP1Q86W92 1011 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 PABPC5Q96DU9 382 aaKnown RBP16.76■□□□□ 0.27
CPNE1-228ENST00000498814 SRRTQ9BXP5 876 aaKnown RBP16.76■□□□□ 0.27
CPNE1-228ENST00000498814 IGFLR1Q9H665 355 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 METTL14Q9HCE5 456 aaKnown RBP16.76■□□□□ 0.27
CPNE1-228ENST00000498814 GDAP2Q9NXN4 497 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 MTRRQ9UBK8 725 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 ARMCX3Q9UH62 379 aaPredicted RBP16.76■□□□□ 0.27
CPNE1-228ENST00000498814 BACE2Q9Y5Z0 518 aa16.76■□□□□ 0.27
CPNE1-228ENST00000498814 PRUNE2Q8WUY3 3088 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 H7C4K7 107 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 STX10O60499 249 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 PHACTR2O75167 634 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 OAZ2O95190 189 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 STAU1O95793 577 aaKnown RBP16.75■□□□□ 0.27
CPNE1-228ENST00000498814 GNA14O95837 355 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 CYP11A1P05108 521 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 ADH1AP07327 375 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 TRIM49P0CI25 452 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 TRIM49CP0CI26 452 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 ODC1P11926 461 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 KLRC2P26717 231 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 NDUFV1P49821 464 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 PPP3CAQ08209 521 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 BIRC3Q13489 604 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 TRPC3Q13507 836 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 SKIV2LQ15477 1246 aaKnown RBP16.75■□□□□ 0.27
CPNE1-228ENST00000498814 ZACNQ401N2 412 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 TMEM184AQ6ZMB5 413 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 C15orf39Q6ZRI6 1047 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 SV2AQ7L0J3 742 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 SLC22A17Q8WUG5 538 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 HPDLQ96IR7 371 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 CLSTN3Q9BQT9 956 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 ANO10Q9NW15 660 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 DSEQ9UL01 958 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 COG5Q9UP83 839 aa16.75■□□□□ 0.27
CPNE1-228ENST00000498814 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-228ENST00000498814 CYB561D2O14569 222 aa16.74■□□□□ 0.27
CPNE1-228ENST00000498814 TBC1D4O60343 1298 aa16.74■□□□□ 0.27
CPNE1-228ENST00000498814 RPL17P18621 184 aaKnown RBP16.74■□□□□ 0.27
CPNE1-228ENST00000498814 ATICP31939 592 aa16.74■□□□□ 0.27
CPNE1-228ENST00000498814 CLCN4P51793 760 aa16.74■□□□□ 0.27
CPNE1-228ENST00000498814 MARSP56192 900 aaKnown RBP16.74■□□□□ 0.27
CPNE1-228ENST00000498814 YWHAHQ04917 246 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-228ENST00000498814 HLA-CQ95604 372 aa16.74■□□□□ 0.27
CPNE1-228ENST00000498814 OXCT2Q9BYC2 517 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-228ENST00000498814 TIMM13Q9Y5L4 95 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-228ENST00000498814 HCFC2Q9Y5Z7 792 aa16.74■□□□□ 0.27
CPNE1-228ENST00000498814 LINC01565O15544 149 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 HUS1O60921 280 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms