RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 TMEM39BQ9GZU3 492 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 MIS12Q9H081 205 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 RXFP1Q9HBX9 757 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 HOMER2Q9NSB8 354 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 SAGE1Q9NXZ1 904 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 PCDHA1Q9Y5I3 950 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 CFBP00751 764 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 TRIM21P19474 475 aaKnown RBP6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 MAPK1P28482 360 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 HOXA13P31271 388 aaPredicted RBP6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 FXR2P51116 673 aaKnown RBP eCLIP6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 NAA20P61599 178 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 FUT2Q10981 343 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 PTK7Q13308 1070 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 DACT2Q5SW24 774 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 PPP4R4Q6NUP7 873 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 AADACL2Q6P093 401 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 LRRC74BQ6ZQY2 392 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 SH3RF1Q7Z6J0 888 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 KRT77Q7Z794 578 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 PHLDB2Q86SQ0 1253 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 OSTM1Q86WC4 334 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 CDAN1Q8IWY9 1227 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 ADGRF4Q8IZF3 695 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP38Q8NB14 1042 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 PPP4R1Q8TF05 950 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 U2AF1L4Q8WU68 220 aaKnown RBP6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 GLG1Q92896 1179 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 TIFAQ96CG3 184 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 FAM114A2Q9NRY5 505 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 ATAD3AQ9NVI7 634 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 VPS51Q9UID3 782 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 FZD1Q9UP38 647 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 CICQ96RK0 1608 aaPredicted RBP6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 FGFR1P11362 822 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 C1QTNF8P60827 252 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 ASIC1P78348 528 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 KRT83P78385 493 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 PFKPQ01813 784 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 CLPPQ16740 277 aaPredicted RBP6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 CFAP221Q4G0U5 840 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 CFAP157Q5JU67 520 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 FAM83BQ5T0W9 1011 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 IQCEQ6IPM2 695 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 VSTM1Q6UX27 236 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 C12orf50Q8NA57 414 aaPredicted RBP6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 SH3TC2Q8TF17 1288 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 STON2Q8WXE9 905 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 E2F7Q96AV8 911 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 MS4A4AQ96JQ5 239 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 EIF2AK1Q9BQI3 630 aaKnown RBP6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 CADM1Q9BY67 442 aaKnown RBP6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 AASDHPPTQ9NRN7 309 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 CROTQ9UKG9 612 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 PCDHA6Q9UN73 950 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 PCDHGA8Q9Y5G5 932 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 PCDHA8Q9Y5H6 950 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 BICDL2A1A5D9 508 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 C2orf71A6NGG8 1288 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 YDJCA8MPS7 323 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 F5H6K3 240 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 NBNO60934 754 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 WFS1O76024 890 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 TDP2O95551 362 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 FGRP09769 529 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 TCP1P17987 556 aaKnown RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 SHMT1P34896 483 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 VHLP40337 213 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 MNX1P50219 401 aaPredicted RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CDK7P50613 346 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZNF131P52739 623 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 TSPY1Q01534 308 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 KLRC3Q07444 240 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 STYK1Q6J9G0 422 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 RBM44Q6ZP01 1051 aaKnown RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 SAMD7Q7Z3H4 446 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 ANKK1Q8NFD2 765 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZNF653Q96CK0 615 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CCDC42Q96M95 316 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CYTH2Q99418 400 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CCSER1Q9C0I3 900 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 SIAEQ9HAT2 523 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 ERVK-5Q9HDB9 667 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CREBZFQ9NS37 354 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 TMEM59LQ9UK28 342 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 TMCC3Q9ULS5 477 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 PCDHGB3Q9Y5G1 929 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 MYH11P35749 1972 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 LGALS16A8MUM7 142 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 FBP2O00757 339 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 KCNK3O14649 394 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CHMP2AO43633 222 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CSPG5O95196 566 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 AGR2O95994 175 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 BCRP11274 1271 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 ECE1P42892 770 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 POLR2FP61218 127 aaKnown RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 TBL3Q12788 808 aaKnown RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 IL17AQ16552 155 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms