RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 ODF1Q14990 250 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 RINT1Q6NUQ1 792 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 SPATS2Q86XZ4 545 aaKnown RBP9.55□□□□□ -0.88
FN1-227ENST00000498719 OR8H1Q8NGG4 311 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 RUFY1Q96T51 708 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 IDI2Q9BXS1 227 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 ATP6V0A4Q9HBG4 840 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 NPHS2Q9NP85 383 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 PDP2Q9P2J9 529 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 BCS1LQ9Y276 419 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 SPATA31A6Q5VVP1 1343 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 ZMYM2Q9UBW7 1377 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 BRWD3Q6RI45 1802 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 IGLV3-22A0A075B6J6 115 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 TMCO5BA8MYB1 307 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 NEMP1O14524 444 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 CEP104O60308 925 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 CPEP16870 476 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 TNFRSF8P28908 595 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 RPS6KA1Q15418 735 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 GLE1Q53GS7 698 aaKnown RBP9.54□□□□□ -0.88
FN1-227ENST00000498719 DAAM2Q86T65 1068 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 SLITRK4Q8IW52 837 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 NAT8LQ8N9F0 302 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 LRRC57Q8N9N7 239 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 RUBCNQ92622 972 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 DYDC2Q96IM9 177 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 PRMT6Q96LA8 375 aaPredicted RBP9.54□□□□□ -0.88
FN1-227ENST00000498719 FAM20AQ96MK3 541 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 NUDT16L1Q9BRJ7 211 aaKnown RBP9.54□□□□□ -0.88
FN1-227ENST00000498719 CAPS2Q9BXY5 557 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 ARHGAP28Q9P2N2 729 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 WRAP73Q9P2S5 460 aaPredicted RBP9.54□□□□□ -0.88
FN1-227ENST00000498719 RNF14Q9UBS8 474 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 TTLL3Q9Y4R7 772 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 IKBKGQ9Y6K9 419 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 GRIN2DO15399 1336 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 FAM221AA4D161 298 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 DDX3XO00571 662 aaKnown RBP eCLIP9.54□□□□□ -0.88
FN1-227ENST00000498719 GIPC1O14908 333 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 SLITRK3O94933 977 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 EPB41P11171 864 aaKnown RBP9.54□□□□□ -0.88
FN1-227ENST00000498719 CIITAP33076 1130 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 JAM2P57087 298 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 ERVK-9P63128 1117 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 GNGT1P63211 74 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 USP4Q13107 963 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 PDCLQ13371 301 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 SLMAPQ14BN4 828 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 GBP6Q6ZN66 633 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 RUFY4Q6ZNE9 571 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 IQCKQ8N0W5 287 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 CPA6Q8N4T0 437 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 GMCL1P1Q8NEA9 526 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 ACER1Q8TDN7 264 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 MASTLQ96GX5 879 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 GMCL1Q96IK5 515 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 CHCHD6Q9BRQ6 235 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 SPATA9Q9BWV2 254 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 CRTAC1Q9NQ79 661 aa9.54□□□□□ -0.88
FN1-227ENST00000498719 GOLGA8KD6RF30 607 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 H3BRJ5 948 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 AREL1O15033 823 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 TLR3O15455 904 aaKnown RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 AHCYL1O43865 530 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 OPA1O60313 960 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 TRIM49P0CI25 452 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 TRIM49CP0CI26 452 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 ITGA4P13612 1032 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 PPFIA1Q13136 1202 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 NNTQ13423 1086 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 ZYXQ15942 572 aaKnown RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 AOC3Q16853 763 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 STRIP1Q5VSL9 837 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 ALS2CLQ60I27 953 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 OTOP1Q7RTM1 612 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 MYLK4Q86YV6 388 aaPredicted RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 METTL13Q8N6R0 699 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 UHMK1Q8TAS1 419 aaKnown RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 U2AF1L4Q8WU68 220 aaKnown RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 DDX1Q92499 740 aaKnown RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 MS4A3Q96HJ5 214 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 HSD17B14Q9BPX1 270 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 TRIM6Q9C030 488 aaPredicted RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 DDX47Q9H0S4 455 aaKnown RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 RASSF4Q9H2L5 321 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 ELAC1Q9H777 363 aaKnown RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 MKS1Q9NXB0 559 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 GGA3Q9NZ52 723 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 IFT80Q9P2H3 777 aaPredicted RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 NFKBIL1Q9UBC1 381 aaPredicted RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 TMEM59LQ9UK28 342 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 TRPC5Q9UL62 973 aaPredicted RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 ZNF646O15015 1829 aaPredicted RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 RBBP6Q7Z6E9 1792 aaKnown RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 RRN3P2A6NIE6 340 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 ZBTB48P10074 688 aaPredicted RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 CYP2J2P51589 502 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 PLS1Q14651 629 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 BMT2Q1RMZ1 405 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms