RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 NUP210Q8TEM1 1887 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-212ENST00000498540 SLC38A8A6NNN8 435 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 E9PMD0 336 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 HRO43593 1189 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 LRP3O75074 770 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 MAPK7Q13164 816 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 PTGDRQ13258 359 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 DMP1Q13316 513 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-212ENST00000498540 SLC10A6Q3KNW5 377 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 SEZ6Q53EL9 994 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 PPM1JQ5JR12 505 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 PRR23CQ6ZRP0 262 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 Q6ZS52 159 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 SPEM1Q8N4L4 309 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 C4orf32Q8N8J7 132 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 LEMD2Q8NC56 503 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 APPL2Q8NEU8 664 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 BEST2Q8NFU1 509 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 TCHPQ9BT92 498 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 RUSC1Q9BVN2 902 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 LRRC3Q9BY71 257 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 CRISPLD1Q9H336 500 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 KMT5AQ9NQR1 393 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 C2orf42Q9NWW7 574 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 LRWD1Q9UFC0 647 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 PCDHB8Q9UN66 801 aa16.06■□□□□ 0.16
TRAF4-212ENST00000498540 KIF26AQ9ULI4 1882 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-212ENST00000498540 A0A1W2PRU2 124 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 K7ESF4 209 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 GDF9O60383 454 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 OR4Q2P0C623 313 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 HOXC13P31276 330 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 STXBP5Q5T5C0 1151 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 TXNDC11Q6PKC3 985 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-212ENST00000498540 TMC8Q8IU68 726 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 GPIHBP1Q8IV16 184 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 CSGALNACT1Q8TDX6 532 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 SNX29Q8TEQ0 813 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 C8orf76Q96K31 380 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 PGLYRP2Q96PD5 576 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 DNAJC25Q9H1X3 360 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 ANKFY1Q9P2R3 1169 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 MAFFQ9ULX9 164 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 TIMM13Q9Y5L4 95 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-212ENST00000498540 MYH11P35749 1972 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 USP24Q9UPU5 2620 aa16.05■□□□□ 0.16
TRAF4-212ENST00000498540 PP2D1A8MPX8 630 aa16.04■□□□□ 0.16
TRAF4-212ENST00000498540 SLC16A4O15374 487 aa16.04■□□□□ 0.16
TRAF4-212ENST00000498540 NEK4P51957 841 aa16.04■□□□□ 0.16
TRAF4-212ENST00000498540 MLLT6P55198 1093 aaPredicted RBP16.04■□□□□ 0.16
TRAF4-212ENST00000498540 SPAG1Q07617 926 aa16.04■□□□□ 0.16
TRAF4-212ENST00000498540 FCHO2Q0JRZ9 810 aa16.04■□□□□ 0.16
TRAF4-212ENST00000498540 LRRC32Q14392 662 aa16.04■□□□□ 0.16
TRAF4-212ENST00000498540 NOLC1Q14978 699 aaKnown RBP eCLIP16.04■□□□□ 0.16
TRAF4-212ENST00000498540 CSRP2Q16527 193 aa16.04■□□□□ 0.16
TRAF4-212ENST00000498540 ST3GAL2Q16842 350 aa16.04■□□□□ 0.16
TRAF4-212ENST00000498540 HEATR6Q6AI08 1181 aaKnown RBP16.04■□□□□ 0.16
TRAF4-212ENST00000498540 YAF2Q8IY57 180 aa16.04■□□□□ 0.16
TRAF4-212ENST00000498540 IGSF22Q8N9C0 903 aa16.04■□□□□ 0.16
TRAF4-212ENST00000498540 DRC1Q96MC2 740 aa16.04■□□□□ 0.16
TRAF4-212ENST00000498540 FOXP1Q9H334 677 aaPredicted RBP16.04■□□□□ 0.16
TRAF4-212ENST00000498540 ZFHX4Q86UP3 3567 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 TSC2P49815 1807 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 SFI1A8K8P3 1242 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 M0QZQ0 153 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 CHADO15335 359 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 PAPSS2O95340 614 aaPredicted RBP16.03■□□□□ 0.16
TRAF4-212ENST00000498540 CXCL8P10145 99 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 MARCKSP29966 332 aaPredicted RBP16.03■□□□□ 0.16
TRAF4-212ENST00000498540 CTHP32929 405 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 KPNA1P52294 538 aaPredicted RBP16.03■□□□□ 0.16
TRAF4-212ENST00000498540 YWHAHQ04917 246 aaPredicted RBP16.03■□□□□ 0.16
TRAF4-212ENST00000498540 RINT1Q6NUQ1 792 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 C1orf186Q6ZWK4 172 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 KCNK18Q7Z418 384 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 LONP2Q86WA8 852 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 TTC8Q8TAM2 541 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 E2F7Q96AV8 911 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 MSANTD3Q96H12 275 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 ZFYVE19Q96K21 471 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 LRRC3BQ96PB8 259 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 MKNK1Q9BUB5 465 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 GPR88Q9GZN0 384 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 RBM19Q9Y4C8 960 aaKnown RBP16.03■□□□□ 0.16
TRAF4-212ENST00000498540 GREB1Q4ZG55 1949 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 ANK1P16157 1881 aa16.03■□□□□ 0.16
TRAF4-212ENST00000498540 MYBPHLA2RUH7 354 aa16.02■□□□□ 0.16
TRAF4-212ENST00000498540 SPECC1L-ADORA2AF8WAN1 911 aa16.02■□□□□ 0.16
TRAF4-212ENST00000498540 TOM1L1O75674 476 aa16.02■□□□□ 0.16
TRAF4-212ENST00000498540 OAZ2O95190 189 aa16.02■□□□□ 0.16
TRAF4-212ENST00000498540 DUSP4Q13115 394 aa16.02■□□□□ 0.16
TRAF4-212ENST00000498540 PDIA5Q14554 519 aa16.02■□□□□ 0.16
TRAF4-212ENST00000498540 ARID3BQ8IVW6 561 aaPredicted RBP16.02■□□□□ 0.16
TRAF4-212ENST00000498540 FAM160A2Q8N612 972 aaPredicted RBP16.02■□□□□ 0.16
TRAF4-212ENST00000498540 TTC9BQ8N6N2 239 aa16.02■□□□□ 0.16
TRAF4-212ENST00000498540 HAPLN2Q9GZV7 340 aa16.02■□□□□ 0.16
TRAF4-212ENST00000498540 C8orf33Q9H7E9 229 aaPredicted RBP16.02■□□□□ 0.16
TRAF4-212ENST00000498540 GTSE1Q9NYZ3 720 aa16.02■□□□□ 0.16
TRAF4-212ENST00000498540 DNM3Q9UQ16 869 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms