RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 SEPT8Q92599 483 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 NKD2Q969F2 451 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 TEKT1Q969V4 418 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ESAMQ96AP7 390 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 DNAJC7Q99615 494 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TRPV6Q9H1D0 765 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SLKQ9H2G2 1235 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 RC3H2Q9HBD1 1191 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 ZNF358Q9NW07 568 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ARHGAP28Q9P2N2 729 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 MOKQ9UQ07 419 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SLC25A15Q9Y619 301 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ZNF541Q9H0D2 1346 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CREBBPQ92793 2442 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 QRICH2Q9H0J4 1663 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CASP8AP2Q9UKL3 1982 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 URB1O60287 2271 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 USP9XQ93008 2570 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 ISM1B1AKI9 464 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 J3QW42 95 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 MDM4O15151 490 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 WDHD1O75717 1129 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 FGBP02675 491 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 VIMP08670 466 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 STAG3L1P0CL83 205 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 VAV1P15498 845 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PDE6AP16499 860 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PTPN1P18031 435 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 ECHS1P30084 290 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 HOXA11P31270 313 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 HADHAP40939 763 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 IARSP41252 1262 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 STX3Q13277 289 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 FHL1Q13642 323 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ARFRP1Q13795 201 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ADCK5Q3MIX3 580 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 MARC1Q5VT66 337 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PRAMEF17Q5VTA0 474 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PLA2G4FQ68DD2 849 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SLC25A24Q6NUK1 477 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TMEM205Q6UW68 189 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 FILIP1Q7Z7B0 1213 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 C12orf40Q86WS4 652 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ZFAND4Q86XD8 727 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SLC9A9Q8IVB4 645 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SUGP1Q8IWZ8 645 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 SYNE4Q8N205 404 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ANKRD35Q8N283 1001 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 GHDCQ8N2G8 530 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 LINC00471Q8N535 108 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SAMD3Q8N6K7 520 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 RNF169Q8NCN4 708 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ATOH1Q92858 354 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 TNPO1Q92973 898 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 C10orf90Q96M02 699 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TCEANC2Q96MN5 208 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 FRMD6Q96NE9 622 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CCT8L2Q96SF2 557 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 APOL4Q9BPW4 351 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PRRG4Q9BZD6 226 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 NSRP1Q9H0G5 558 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 SIL1Q9H173 461 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 IKZF4Q9H2S9 585 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 RIMS4Q9H426 269 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 EPS8L2Q9H6S3 715 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 NGBQ9NPG2 151 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 EXOC6BQ9Y2D4 811 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 HYOU1Q9Y4L1 999 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SUPT16HQ9Y5B9 1047 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 RBM8AQ9Y5S9 174 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 HCFC2Q9Y5Z7 792 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ZHX2Q9Y6X8 837 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 NOTCH1P46531 2555 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SCN7AQ01118 1682 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SPATA31A1Q5TZJ5 1347 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 FAM231BA6NCW3 169 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 LOC730098B7Z3J9 87 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 AP3D1O14617 1153 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SLC22A2O15244 555 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 FANCGO15287 622 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 DDHD2O94830 711 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SASH1O94885 1247 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CCNB2O95067 398 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 IGLV1-40P01703 118 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 FBXO45P0C2W1 286 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 UBBP0CG47 229 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ENGP17813 658 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CYP7A1P22680 504 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 IVDP26440 423 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ANXA13P27216 316 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SMARCA1P28370 1054 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ABCD1P33897 745 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PPP1CCP36873 323 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 TECP42680 631 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 MAGEA11P43364 429 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 RFX2P48378 723 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SULT1A2P50226 295 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PPP2R2AP63151 447 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 OLR1P78380 273 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 MXRA7P84157 204 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms