RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 ADRB2P07550 413 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 ZNF131P52739 623 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 KARSQ15046 597 aaKnown RBP20.17■□□□□ 0.82
PRKCB-209ENST00000498058 ZNF687Q8N1G0 1237 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 KCNG4Q8TDN1 519 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 BICD1Q96G01 975 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 ASB16Q96NS5 453 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 LRRC3Q9BY71 257 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 OSBPL6Q9BZF3 934 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 KCNG1Q9UIX4 513 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 ODF2LQ9ULJ1 636 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 GPR179Q6PRD1 2367 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 TICRRQ7Z2Z1 1910 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 SCN1AP35498 2009 aa20.17■□□□□ 0.82
PRKCB-209ENST00000498058 TSC2P49815 1807 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 TISP43B9A030 160 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 MICAL2O94851 1124 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 CPB1P15086 417 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 PLCG1P19174 1290 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 VIPR2P41587 438 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 LIG4P49917 911 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 EPHA5P54756 1037 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 VITQ6UXI7 678 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 PDZD4Q76G19 769 aaPredicted RBP20.16■□□□□ 0.82
PRKCB-209ENST00000498058 MYCT1Q8N699 235 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 CLDN23Q96B33 292 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 AK8Q96MA6 479 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 PGLYRP2Q96PD5 576 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 TMEM209Q96SK2 561 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 BCO2Q9BYV7 579 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 DNAJC25Q9H1X3 360 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 IKZF4Q9H2S9 585 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 SEMA4AQ9H3S1 761 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 SPATA6Q9NWH7 488 aaPredicted RBP20.16■□□□□ 0.82
PRKCB-209ENST00000498058 UBQLN1Q9UMX0 589 aaKnown RBP20.16■□□□□ 0.82
PRKCB-209ENST00000498058 SMC3Q9UQE7 1217 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 YIPF1Q9Y548 306 aa20.16■□□□□ 0.82
PRKCB-209ENST00000498058 A0A0B4J269 797 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 ANKRD63C9JTQ0 380 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 K7ENM7 598 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 SPTLC1O15269 473 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 OGTO15294 1046 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 MYL4P12829 197 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 CYP3A5P20815 502 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 MARCKSP29966 332 aaPredicted RBP20.15■□□□□ 0.82
PRKCB-209ENST00000498058 NMT1P30419 496 aaKnown RBP20.15■□□□□ 0.82
PRKCB-209ENST00000498058 YWHAHQ04917 246 aaPredicted RBP20.15■□□□□ 0.82
PRKCB-209ENST00000498058 PPP2R3AQ06190 1150 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 LARP1BQ659C4 914 aaKnown RBP20.15■□□□□ 0.82
PRKCB-209ENST00000498058 USP49Q70CQ1 688 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 DCLK2Q8N568 766 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 TTC9BQ8N6N2 239 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 SUMF1Q8NBK3 374 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 SHKBP1Q8TBC3 707 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 RAD54LQ92698 747 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 RSPRY1Q96DX4 576 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 ZNF512Q96ME7 567 aaPredicted RBP20.15■□□□□ 0.82
PRKCB-209ENST00000498058 ZFP14Q9HCL3 533 aa20.15■□□□□ 0.82
PRKCB-209ENST00000498058 CPSF3Q9UKF6 684 aaKnown RBP20.15■□□□□ 0.82
PRKCB-209ENST00000498058 ZNF197O14709 1029 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 HNRNPDLO14979 420 aaKnown RBP20.14■□□□□ 0.81
PRKCB-209ENST00000498058 SLC26A4O43511 780 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 TRAK2O60296 914 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 FAM13AO94988 1023 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 UBA7P41226 1012 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 SF3A1Q15459 793 aaKnown RBP20.14■□□□□ 0.81
PRKCB-209ENST00000498058 TEAD2Q15562 447 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 CYP4A22Q5TCH4 519 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 SPATA1Q5VX52 437 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 JADE1Q6IE81 842 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 TMC8Q8IU68 726 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 MAP4K3Q8IVH8 894 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 CALML4Q96GE6 196 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 RPF1Q9H9Y2 349 aaKnown RBP20.14■□□□□ 0.81
PRKCB-209ENST00000498058 PARVGQ9HBI0 331 aa20.14■□□□□ 0.81
PRKCB-209ENST00000498058 H0YCG3 227 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 NFICP08651 508 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 ID4P47928 161 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 CDR1P51861 262 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 GTF2BQ00403 316 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 DUSP4Q13115 394 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 ZC2HC1CQ53FD0 456 aaPredicted RBP20.13■□□□□ 0.81
PRKCB-209ENST00000498058 IQCEQ6IPM2 695 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 TSSK4Q6SA08 328 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 DSTYKQ6XUX3 929 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 SMARCD2Q92925 531 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 FAM212AQ96EL1 285 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 ZNF334Q9HCZ1 680 aaPredicted RBP20.13■□□□□ 0.81
PRKCB-209ENST00000498058 MAFFQ9ULX9 164 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 SLC27A5Q9Y2P5 690 aa20.13■□□□□ 0.81
PRKCB-209ENST00000498058 LAMTOR5O43504 91 aa20.12■□□□□ 0.81
PRKCB-209ENST00000498058 SOAT2O75908 522 aa20.12■□□□□ 0.81
PRKCB-209ENST00000498058 LILRA4P59901 499 aa20.12■□□□□ 0.81
PRKCB-209ENST00000498058 CSTF1Q05048 431 aaKnown RBP20.12■□□□□ 0.81
PRKCB-209ENST00000498058 GPR17Q13304 367 aa20.12■□□□□ 0.81
PRKCB-209ENST00000498058 ZNF528Q3MIS6 628 aa20.12■□□□□ 0.81
PRKCB-209ENST00000498058 STXBP5Q5T5C0 1151 aa20.12■□□□□ 0.81
PRKCB-209ENST00000498058 CENPPQ6IPU0 288 aa20.12■□□□□ 0.81
PRKCB-209ENST00000498058 ZNF852Q6ZMS4 543 aa20.12■□□□□ 0.81
PRKCB-209ENST00000498058 GPIHBP1Q8IV16 184 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms